Pairwise Alignments

Query, 311 a.a., Motility protein B from Methylophilus sp. DMC18

Subject, 243 a.a., chemotaxis MotB protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 53/244 (21%), Positives = 103/244 (42%), Gaps = 30/244 (12%)

Query: 17  WLISYADFITLLFAFFVVMYATSNINLNKYRALSSSVVN-AFQGQPGAVGQPQNMPQGLQ 75
           W ++YADF+T + AFF++M+  +  +      L+    + A + Q   V    N P    
Sbjct: 10  WKVAYADFVTAMMAFFLLMWILNMTSKETKEGLAGYFSSDAAKMQSNNVSPVANNPFVQS 69

Query: 76  TPGLPVPGAQNQNGQVPSAVMKPLPLSYLYQEKKLRDQEKIR-AMAQQLANTL-GQWIEQ 133
           T  L                          ++ K+ + E+   A+AQ+L   L      Q
Sbjct: 70  TDKLDT------------------------RDFKITEVERSHYAIAQKLRQMLMADATPQ 105

Query: 134 KQITVYQSDLGVEMDISTHLLFQNNQAAYTPQASQILHIISAQLKNEYRTLQVEGHSDKH 193
               +   D+GV++ +++ +++    A   P+ +++L  +   LK     L V GH+D  
Sbjct: 106 SASGISADDVGVQLRVNSDIMYAPGSAELAPEGAKVLDDVIRILKEYNLYLVVRGHTDSG 165

Query: 194 TFSGMVDAESKRWTLTATQAARVAATLAADG-IAAKRLSALGLAETRPVSSSDNNLAQSL 252
                +   +  W L+  +AA     +   G I   RL ++  A+TRP+  + +  +++ 
Sbjct: 166 EPRNSIYPSN--WELSGARAAAAVRYIITHGEIKPTRLRSIAYADTRPLEPNTSPDSRAK 223

Query: 253 NSRI 256
           N R+
Sbjct: 224 NRRV 227