Pairwise Alignments

Query, 604 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 459 a.a., component of McrBC 5-methylcytosine restriction system (VIMSS) from Escherichia coli BW25113

 Score =  114 bits (286), Expect = 7e-30
 Identities = 80/221 (36%), Positives = 118/221 (53%), Gaps = 32/221 (14%)

Query: 325 RDYIVNDNIQGWKPYTPAIGEYLKNKYGITVENTDNTNKKFVLIIDEINRGNISKIFGEL 384
           + Y   D IQG++P            Y    +  +   KK++ IIDEINR N+SK+FGE+
Sbjct: 234 QSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKEQPEKKYIFIIDEINRANLSKVFGEV 293

Query: 385 ITLIEPDKRIGELNELTVTLPYSKKD---FGLPSNLYILGTMNTADRSIALVDTALRRRF 441
           + L+E DKR GE    +V L YS+ D   F +P N+YI+G MNTADRS+A+VD ALRRRF
Sbjct: 294 MMLMEHDKR-GE--NWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAVVDYALRRRF 350

Query: 442 EFNEMMPDVKKLGFDIKGIQIDIM---------------LESINKRIE---YFRGRDHTI 483
            F ++ P     GFD    +  ++               +  +N+ I       G+   I
Sbjct: 351 SFIDIEP-----GFDTPQFRNFLLNKKAEPSFVESLCQKMNELNQEISKEATILGKGFRI 405

Query: 484 GHAYF-MDLINETNEQVRFKKLQEIFQYKVIPLLQEYFYEN 523
           GH+YF   L + T+   ++  L EI    + PLL+EYF+++
Sbjct: 406 GHSYFCCGLEDGTSPDTQW--LNEIVMTDIAPLLEEYFFDD 444



 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 28/114 (24%)

Query: 165 NTILYGPPGTGKTYRVIEEAVAIIDGKIPKGRVNLVKRYKELKERGQIEFITFHQSYCYE 224
           N IL GPPG GKT+     A  +   K P+ RVN+V+               FHQSY YE
Sbjct: 196 NIILQGPPGVGKTFVARRLAYLLTGEKAPQ-RVNMVQ---------------FHQSYSYE 239

Query: 225 DFIEGIKPVLENSDENSIEYKIEDGIFKKMVNKAIEVKSSSNFDEKYAKFVEDV 278
           DFI+G +P       N + ++ +DGIF     +A E       ++KY   ++++
Sbjct: 240 DFIQGYRP-------NGVGFRRKDGIFYNFCQQAKEQP-----EKKYIFIIDEI 281