Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 352 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 25/113 (22%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 51  EKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLYYLNHDD 110
           E+A++L PD+  A+     L D +G  +++ + L + L   P++ ++ + LG++ L+H +
Sbjct: 200 EQAMRLQPDNLQAVVAQIELLDKQGKTDESRQLLARQLAAHPESAYLQHALGMWLLHHGE 259

Query: 111 N-MAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKDQ 162
              A+    KA+ ++P+N+     L  T +   +   ++   E+  + +P ++
Sbjct: 260 RPYALLGLSKAVELEPDNQDYRYDLATTLHAQQELEAAQRQLEEVVQRHPANR 312



 Score = 28.9 bits (63), Expect = 1e-04
 Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 1/119 (0%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLG- 102
           D++ +   + +  +P+ A     LG      G+R  A   L+KA+E+EP N    Y+L  
Sbjct: 227 DESRQLLARQLAAHPESAYLQHALGMWLLHHGERPYALLGLSKAVELEPDNQDYRYDLAT 286

Query: 103 LYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKD 161
             +   +   A    E+ ++  P N      L   + + G   N ++   +  + NP D
Sbjct: 287 TLHAQQELEAAQRQLEEVVQRHPANRKARVLLINYWKESGQLQNVQVLLAQLEQQNPDD 345



 Score = 23.5 bits (49), Expect = 0.004
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 101 LGLYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINP 159
           LGLY+        +  F K L+  PE    W QL   Y        ++   E+A  + P
Sbjct: 151 LGLYF--GPSQQVLDEFVKKLKAQPETAEGWIQLARLYIHSALLPEAQNALEQAMRLQP 207