Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 829 a.a., TPR domain protein, putative component of TonB system from Variovorax sp. SCN45

 Score = 45.1 bits (105), Expect = 3e-09
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGL 103
           D++ E Y+ A++  P+    ++ LG     +G  + A E L KALE+ P+      NLG+
Sbjct: 282 DESEELYKLALESMPEQEALLNNLGATNFRQGRYDAAIEVLKKALELHPRQVLARCNLGV 341

Query: 104 -YYLNHDDNMAIGCFEKALRIDPE 126
            Y +      AI  FE+ LR DP+
Sbjct: 342 TYVMAGQSEAAIAEFEQCLRDDPD 365



 Score = 29.6 bits (65), Expect = 1e-04
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 117 FEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKDQYSDMIEKCNEGI 174
           ++ AL   PE E   + LG T +  G Y  +    +KA E++P+     ++ +CN G+
Sbjct: 288 YKLALESMPEQEALLNNLGATNFRQGRYDAAIEVLKKALELHPR----QVLARCNLGV 341



 Score = 28.5 bits (62), Expect = 3e-04
 Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 2/105 (1%)

Query: 57  NPDDANAISFLGTLYDGEGDREKAYEYLTK-ALEMEPKNPWMYYNLGLYYLNHDD-NMAI 114
           +P+   A+  +    +G   R    E L K ALE  P+   +  NLG         + AI
Sbjct: 260 DPEAVAALYGVCAALEGAAMRFDESEELYKLALESMPEQEALLNNLGATNFRQGRYDAAI 319

Query: 115 GCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINP 159
              +KAL + P        LG TY   G    +   FE+    +P
Sbjct: 320 EVLKKALELHPRQVLARCNLGVTYVMAGQSEAAIAEFEQCLRDDP 364