Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 673 a.a., transcriptional regulator, SARP family from Sphingobium sp. HT1-2

 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 14/127 (11%)

Query: 51  EKAIKLNPDDANAISFLGTLY-----------DGEGDREKAYEYLTKALEMEPKNPWMYY 99
           E+AI L P   NA   L  LY           D    R +A++  T+A+ +EP +  +  
Sbjct: 440 ERAILLEPRLTNAYLQLARLYNTDFMQLMAGHDAAPLRARAFDLCTRAVALEPTHGGVQS 499

Query: 100 NLGLYYLNHDD-NMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEIN 158
            L   YL   D   A+  F  AL + P +    +++G+    +G+   ++    +A+E+N
Sbjct: 500 RLAWCYLRRGDMKQAMQGFMTALDLTPFHADGINEIGFGLVHLGEMKEAQRLIARAFELN 559

Query: 159 --PKDQY 163
             P D+Y
Sbjct: 560 PFPSDEY 566



 Score = 25.0 bits (53), Expect = 0.003
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 45  KAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLY 104
           +A +   +A+ L P      S L   Y   GD ++A +    AL++ P +      +G +
Sbjct: 479 RAFDLCTRAVALEPTHGGVQSRLAWCYLRRGDMKQAMQGFMTALDLTPFHADGINEIG-F 537

Query: 105 YLNHDDNM--AIGCFEKALRIDP-ENECCWSQLGYTYYDIGDYTNSKLNFE 152
            L H   M  A     +A  ++P  ++  +S L   Y   G++  ++  FE
Sbjct: 538 GLVHLGEMKEAQRLIARAFELNPFPSDEYFSDLAVLYALSGEHEAAETQFE 588