Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 351 a.a., conserved protein of unknown function containing tetratricopeptide repeat domain from Pseudomonas putida KT2440

 Score = 44.3 bits (103), Expect = 2e-09
 Identities = 26/122 (21%), Positives = 57/122 (46%), Gaps = 1/122 (0%)

Query: 42  DNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNL 101
           D   A    ++A+ + P + +A++    L + +G  + + + L KAL + P + ++ Y L
Sbjct: 190 DYTHAAAALQRALAVAPGNLDALATQVRLLERQGHHDASRQVLGKALALSPDSAFLQYEL 249

Query: 102 GLYYLNHDD-NMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPK 160
           GL+   H+    A+    +A+ +DP+N      L  T +++     ++   E      P 
Sbjct: 250 GLWLKRHEQREYALLALSRAVELDPDNADYRYTLAVTLHELDQLDAAQKQLETVLNRQPA 309

Query: 161 DQ 162
           ++
Sbjct: 310 NR 311



 Score = 27.7 bits (60), Expect = 2e-04
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 75  GDREKAYEYLTKALEMEPKNPWMYYNLGLYYLNHDD-NMAIGCFEKALRIDPEN 127
           G  + A E   +ALE +P++     +L   YL+ +D   A    ++AL + P N
Sbjct: 155 GPLQSALEQYQQALEQQPEDADAQVHLARLYLHENDYTHAAAALQRALAVAPGN 208



 Score = 24.3 bits (51), Expect = 0.002
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 101 LGLYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINP 159
           +GLY+       A+  +++AL   PE+      L   Y    DYT++    ++A  + P
Sbjct: 150 IGLYF--GPLQSALEQYQQALEQQPEDADAQVHLARLYLHENDYTHAAAALQRALAVAP 206