Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 4/130 (3%)

Query: 46  AIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLYY 105
           A+E ++  +K +  +A+ IS    +       E+A   L +AL ++P NP+ Y +     
Sbjct: 53  ALEDFDLLLKTDQYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLK 112

Query: 106 LNHDD-NMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEI---NPKD 161
               D   AI  +EKA+ +DPE+   ++  G     +G    SK +F+KA ++    PK+
Sbjct: 113 DRIGDLEGAIADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKE 172

Query: 162 QYSDMIEKCN 171
             S    K N
Sbjct: 173 YKSTNAPKEN 182



 Score = 38.9 bits (89), Expect = 7e-08
 Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 1/122 (0%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNP-WMYYNLG 102
           ++A+E + + +   P+    +   G +    G  E A E     L+ +  N  ++     
Sbjct: 17  EEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISDRAV 76

Query: 103 LYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKDQ 162
           + +L   +  A+   ++AL +DP N   +S   +    IGD   +  ++EKA E++P+D 
Sbjct: 77  VLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPEDA 136

Query: 163 YS 164
            S
Sbjct: 137 VS 138



 Score = 37.7 bits (86), Expect = 1e-07
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query: 43  NDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLG 102
           N++A+   ++A+ L+P++    S    L D  GD E A     KA+EM+P++   Y N G
Sbjct: 84  NEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPEDAVSYNNKG 143

Query: 103 L 103
           +
Sbjct: 144 I 144



 Score = 31.2 bits (69), Expect = 1e-05
 Identities = 18/57 (31%), Positives = 33/57 (57%)

Query: 42  DNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMY 98
           D + AI  YEKAI+++P+DA + +  G + +  G +E++ +   KA ++    P  Y
Sbjct: 117 DLEGAIADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKEY 173