Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 468 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 1/117 (0%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGL 103
           +KA E Y   I     ++    +L   ++     +KA+ Y  K+ +++P+    ++ LG+
Sbjct: 254 EKATEAYLNTINSEGANSENCCYLAAAFEKLDQMDKAFTYFKKSAKLDPEYDDAWFGLGM 313

Query: 104 YYLNHDDNM-AIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINP 159
             L  D    AI  F+KAL++   N   W  L    Y +G+   S   +E+A  + P
Sbjct: 314 CMLKKDKFFEAIHYFKKALKLSSVNANYWVGLADAEYHLGNLQASSEAYEEAINLEP 370



 Score = 46.2 bits (108), Expect = 8e-10
 Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 11/134 (8%)

Query: 26  EKSQEMAEIGFAYIGIDN-DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYL 84
           +K++    +G  Y   +N +KAI +Y+ A+KL  +  +A+  L  + + EG  ++  ++ 
Sbjct: 133 DKAEIYYSLGNFYRAENNTEKAIFHYKNAVKLKINHEDALFQLAMITEEEGSFDEILQFY 192

Query: 85  TKALEMEPKNPWMYYNLGLYY--LNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIG 142
            + ++ +P +   +YNLG+ Y  L   +  AI  ++ AL ID             Y+++G
Sbjct: 193 QEFIDQDPYSAEAWYNLGVVYNRLGRYEE-AINAYDYALIID-------DSFASAYFNMG 244

Query: 143 DYTNSKLNFEKAYE 156
           +   +   +EKA E
Sbjct: 245 NALMNTQQYEKATE 258



 Score = 35.0 bits (79), Expect = 2e-06
 Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 15/173 (8%)

Query: 12  MSTCFAGCFEQNNLEKSQEMAEIGFAYIGIDNDK---AIEYYEKAIKLNPDDANAISFLG 68
           M   F    +   L+   + A  G     +  DK   AI Y++KA+KL+  +AN    L 
Sbjct: 287 MDKAFTYFKKSAKLDPEYDDAWFGLGMCMLKKDKFFEAIHYFKKALKLSSVNANYWVGLA 346

Query: 69  TLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLYYLNHDD-NMAIGCFEKALRIDPEN 127
                 G+ + + E   +A+ +EP     Y NL + Y + +    AI   ++ +   PE+
Sbjct: 347 DAEYHLGNLQASSEAYEEAINLEPGLMETYVNLSIIYFDQNRFEEAIDVLKEGIDELPED 406

Query: 128 ECCWSQLGYTYYDIGDYTNS--------KLNFEK---AYEINPKDQYSDMIEK 169
              + +L       G Y  +         L+FE+    Y++ P+ ++   I K
Sbjct: 407 AELYYRLVVYLIKTGKYKEAFSYLENALTLDFERHEILYDLMPEVKHQKAIYK 459



 Score = 29.6 bits (65), Expect = 8e-05
 Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 35/136 (25%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGL 103
           ++ +E  E    L+P++   +  L       G  ++A + L   L M      +YY+LG 
Sbjct: 84  EEGLEVLENINNLSPNNEEIVLALSNGLLLNGSVKEAIQILEDFLPMAEDKAEIYYSLGN 143

Query: 104 YY--------------------LNHDDNM--------AIGCFEKALRI-------DPENE 128
           +Y                    +NH+D +          G F++ L+        DP + 
Sbjct: 144 FYRAENNTEKAIFHYKNAVKLKINHEDALFQLAMITEEEGSFDEILQFYQEFIDQDPYSA 203

Query: 129 CCWSQLGYTYYDIGDY 144
             W  LG  Y  +G Y
Sbjct: 204 EAWYNLGVVYNRLGRY 219