Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 937 a.a., tetratricopeptide repeat protein from Alteromonas macleodii MIT1002

 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 1/121 (0%)

Query: 42  DNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNL 101
           D   A+  Y   +   PD   AI+ L ++     D  KA   + KA+ +EP+N   +   
Sbjct: 149 DEQCALRDYNTIVSRTPDFVPAINGLASIALQNEDLSKATSLINKAMSLEPENAITWRLK 208

Query: 102 G-LYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPK 160
           G L Y   D + A    +KAL  + ++      L   Y +  DY  +KL  ++  E  P 
Sbjct: 209 GQLAYRQGDTDAATAHLQKALTFNRDDPIALRNLVDLYLEAKDYDTAKLFVDEIIEDTPN 268

Query: 161 D 161
           D
Sbjct: 269 D 269



 Score = 36.2 bits (82), Expect = 2e-06
 Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 3/97 (3%)

Query: 35  GFAYIGIDND---KAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEME 91
           G A I + N+   KA     KA+ L P++A      G L   +GD + A  +L KAL   
Sbjct: 173 GLASIALQNEDLSKATSLINKAMSLEPENAITWRLKGQLAYRQGDTDAATAHLQKALTFN 232

Query: 92  PKNPWMYYNLGLYYLNHDDNMAIGCFEKALRIDPENE 128
             +P    NL   YL   D      F   +  D  N+
Sbjct: 233 RDDPIALRNLVDLYLEAKDYDTAKLFVDEIIEDTPND 269



 Score = 31.6 bits (70), Expect = 4e-05
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 37  AYIGIDNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPW 96
           AY   D D A  + +KA+  N DD  A+  L  LY    D + A  ++ + +E  P +P 
Sbjct: 212 AYRQGDTDAATAHLQKALTFNRDDPIALRNLVDLYLEAKDYDTAKLFVDEIIEDTPNDP- 270

Query: 97  MYYNLGLYYLNHDDNMAI 114
           +   L  +  + D+  AI
Sbjct: 271 LAILLNSWLQSRDNQQAI 288



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 19/82 (23%), Positives = 36/82 (43%)

Query: 21  EQNNLEKSQEMAEIGFAYIGIDNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKA 80
           + N L  ++    +   +I      A  Y  +A +L P+ A  +   G +   +GD E +
Sbjct: 817 QPNLLNPAEAYNRLAIMHIEESLVTAKNYARQAYELQPNSAKILDTYGHIKALQGDYEGS 876

Query: 81  YEYLTKALEMEPKNPWMYYNLG 102
            + L  A   +  +P + Y+LG
Sbjct: 877 LKMLRDAFARDANDPNIRYHLG 898



 Score = 23.9 bits (50), Expect = 0.008
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYL 84
           ++A + Y   + L P +  A   + +LY  +GD + A  +L
Sbjct: 567 EEAKQIYLDILTLTPSNTGARERVSSLYQQQGDTKNALYHL 607