Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 267 a.a., Lipopolysaccharide assembly protein B from Acinetobacter radioresistens SK82

 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 31/185 (16%)

Query: 5   LLIFLILMSTCFAGCFEQNNLEKSQEMA-----EIGFAYIGI-DNDKAIEYYEKAIKLNP 58
           +L+ + L +     C   + L K  E A     ++   YI   D D A    ++A++++ 
Sbjct: 10  VLLTVTLSALLVTACQTPDTLSKDPEKAVKVRTQLAAEYIKSGDLDAAKRALDQALEVDS 69

Query: 59  DDANAISFLGTLYDGEGDR---EKAYEYLTKALEMEPKNPWMYYNLGLYYLNHDDNMAIG 115
            DA A   +G L   EG +   +KA  Y  +++ +EPKN     N G Y         IG
Sbjct: 70  RDATANMMMGVLLQQEGSQLNLDKAESYFRRSISIEPKNAQARNNYGAYLYQ------IG 123

Query: 116 CFEKALRIDPENECCWSQLGY------------TYYDIGDYTNSKLNFEKAYEINPKDQY 163
            ++ A+    + E   + LGY             Y  +G+  N++  F++A + N +D  
Sbjct: 124 RYKDAIE---QLEIAGATLGYEQRYQALENLGRIYLKLGNVANAEKTFKQALQAN-RDSS 179

Query: 164 SDMIE 168
             M+E
Sbjct: 180 ISMLE 184