Pairwise Alignments

Query, 272 a.a., imidazole glycerol phosphate synthase subunit HisF from Methanococcus maripaludis S2

Subject, 245 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Pseudomonas simiae WCS417

 Score = 90.1 bits (222), Expect = 4e-23
 Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 32/231 (13%)

Query: 6   IIPCLDIKEGRVVK---GTNFVELRDAGDPVELSKIYNEQGADELVFLDITASFEKRDII 62
           IIP +D+K+G  V+   G        + DPV ++  + E G   L  +D+  +FE + + 
Sbjct: 3   IIPAIDLKDGACVRLRQGRMEDSTVFSDDPVSMAAKWVEGGCRRLHLVDLNGAFEGQPVN 62

Query: 63  IDVVKRTAEQV-FIPLTVGGGIKTVDDFRKILRAGADKISINTSAVKTPDLIKEASEIFG 121
            +VV   A++   +P+ +GGGI++++     ++AG   + I T AVK P  + EA   F 
Sbjct: 63  GEVVTAIAKRYPSLPIQIGGGIRSLETIEHYVKAGVSYVIIGTKAVKDPAFVAEACRAFP 122

Query: 122 TQCVVVAMDVKRKYI-TDSQDENLKNKNIFETKLGSCWFEVYIYGGREGTGIDAIEWAKK 180
            + V+V +D K  ++ TD                   W E+        + +  I+ AK+
Sbjct: 123 GK-VIVGLDAKDGFVATDG------------------WAEI--------STVQVIDLAKQ 155

Query: 181 VEYLGAGEILLTSMDADGTKDGYDLVLTKAISENTKLPIIASGGCGNANHV 231
            E  G   I+ T +  DG   G ++  T A++  TK+P+IASGG  N   +
Sbjct: 156 FEADGVSAIVYTDIAKDGMMQGCNVPFTAALAAATKIPVIASGGIHNLGDI 206



 Score = 32.7 bits (73), Expect = 8e-06
 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 2/96 (2%)

Query: 5   RIIPCLDIKEGRVVKGTNFVELRDAGDPVELSKIYNEQGADELVFLDITASFEKRDIIID 64
           ++I  LD K+G V     + E+      ++L+K +   G   +V+ DI      +   + 
Sbjct: 124 KVIVGLDAKDGFVATD-GWAEISTV-QVIDLAKQFEADGVSAIVYTDIAKDGMMQGCNVP 181

Query: 65  VVKRTAEQVFIPLTVGGGIKTVDDFRKILRAGADKI 100
                A    IP+   GGI  + D + +L A A  I
Sbjct: 182 FTAALAAATKIPVIASGGIHNLGDIKSLLDAKAPGI 217