Pairwise Alignments

Query, 157 a.a., GTP-binding protein from Methanococcus maripaludis S2

Subject, 477 a.a., GTPase Der from Methylophilus sp. DMC18

 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 16/167 (9%)

Query: 6   KIVVMGSEDVGKTTLMENLI--KNVGKVEHNGTTVAIDYGRIEMDDKKFHFFGTPGQERF 63
           +I ++G  +VGK+TL+  L+    V   +  GTT       +E + K +    T G  + 
Sbjct: 180 RIAIVGRPNVGKSTLVNALLGEDRVIAFDQPGTTRDSIEIALEKNGKHYTIIDTAGVRKR 239

Query: 64  GFMREI-----------AVEGADYALLVLDATVGLRKVDNDIINLLSTKNIPFSVFINKM 112
           G + E            A+E A+ A+LV+DA  G+ + D  +   +        V INK 
Sbjct: 240 GKVFEAVEKFSVIKTMQAIEDANVAILVVDAQEGITEQDAHVAAYIVDAGRALVVAINKW 299

Query: 113 DLCNESNAVEIINNLNGLIESSNIVTG---SIYRKEGLSEIMDQLKI 156
           D   +     I   ++  ++  +       S  RK+GL+E++D + +
Sbjct: 300 DGLQDDEREWIKREIDRKLQFLDFAKFHYISALRKKGLNELLDSVDV 346



 Score = 34.3 bits (77), Expect = 3e-06
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 11/118 (9%)

Query: 7   IVVMGSEDVGKTTLMENLIKNVGKVEHN--GTTVAIDYGRIEMDDKKFHFFGTPGQERF- 63
           IV++G  +VGK+TL   L K+   +  +  G T    YGR     + +    T G E   
Sbjct: 5   IVLVGRPNVGKSTLFNRLTKSRDALVADLPGLTRDRHYGRGLGASQPYLVIDTGGFEPTA 64

Query: 64  --GFMRE------IAVEGADYALLVLDATVGLRKVDNDIINLLSTKNIPFSVFINKMD 113
             G ++E      +A++ AD  + ++DA  GL   +  I   L     P  + +NK +
Sbjct: 65  DTGILKEMAKQTLLAIDEADVIIFLVDARAGLTPQEFTIAQTLRKAQRPVLLAVNKTE 122