Pairwise Alignments

Query, 157 a.a., GTP-binding protein from Methanococcus maripaludis S2

Subject, 476 a.a., GTP-binding protein from Agrobacterium fabrum C58

 Score = 43.9 bits (102), Expect = 4e-09
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 11/118 (9%)

Query: 7   IVVMGSEDVGKTTLMENLI-KNVGKVEHN-GTTVAIDYGRIEMDDKKFHFFGTPGQERFG 64
           + ++G  +VGK+TL   L+ K +  V+   G T     G  ++ D +F    T G E+ G
Sbjct: 5   VAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDRRPGDAKLIDLRFTIIDTAGLEQSG 64

Query: 65  ---------FMREIAVEGADYALLVLDATVGLRKVDNDIINLLSTKNIPFSVFINKMD 113
                       E A++ AD  L V+DA  GL   D  +  +L  +  P  +  NK +
Sbjct: 65  PETLQGRMWAQTEAAIDEADVTLFVIDAKAGLTPADETLGEMLRRRGKPVVLVANKSE 122



 Score = 33.9 bits (76), Expect = 4e-06
 Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 13/131 (9%)

Query: 3   KELKIVVMGSEDVGKTTLMENLIKNVGKVEHNGTTVAIDYGRIEMD--DKKFHFFGTPGQ 60
           K L++ ++G  + GK+TL+   +     +      +  D   +E D   +    F T G 
Sbjct: 203 KPLRVAIIGRPNAGKSTLINRFLGEDRLLTGPEAGITRDSISVEWDWRGRTIKMFDTAGM 262

Query: 61  ERFGFMREI-----------AVEGADYALLVLDATVGLRKVDNDIINLLSTKNIPFSVFI 109
            R   + E            ++  A+  ++V D+T+   K D  +++L+  +     +  
Sbjct: 263 RRKAKVTEKLEKLSVADSLRSIRFAETVVIVFDSTIPFEKQDLQLVDLVIREGRAAVLAF 322

Query: 110 NKMDLCNESNA 120
           NK DL  +  A
Sbjct: 323 NKWDLVEDPQA 333