Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 289 a.a., putative transcriptional regulator LysR family from Pseudomonas putida KT2440

 Score =  103 bits (258), Expect = 4e-27
 Identities = 87/299 (29%), Positives = 150/299 (50%), Gaps = 25/299 (8%)

Query: 6   SYFQTFLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLTTEGNI 65
           S  + F   A+  S ++AAKKLG++Q TV+  I  LE  +  +LF R    + L+ EG  
Sbjct: 4   SELKAFYMVARLGSITQAAKKLGLSQPTVTTQIRSLEGQYAVELFYRGGRRLVLSEEGLR 63

Query: 66  LYENAEKLLENISNAKQQMRILHEHPEGLIRIAASTTPGEHLLPSIIKDYTKVYRD---- 121
           L    + LL+  ++ + ++R   +  +G +RIAA+        P  I D  K+YR+    
Sbjct: 64  LLPMVKALLQQEADIEFELRNSGQ-AQGSLRIAATA-------PYYILDLVKIYRERLPQ 115

Query: 122 VSFQIQITDSEKCFKLLEDRAVDIIAVGN-IYDGSYESEVIGKDRLVLVVPPDHELAKKG 180
           V   ++I +S++  ++LED  VDI A    + D      ++G D LV+ V  +H LA + 
Sbjct: 116 VEVAVEIGNSQQVLEMLEDYRVDIAASSQWVEDARLVRRILGTDPLVVAVHRNHPLAHRQ 175

Query: 181 VAKLSDILKEDYIDREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSEGYG 240
              +  +     + RE GS TR++    +Q+ G   +    +M +GS  SI  AV    G
Sbjct: 176 TVSIEVVSGHCLLMREKGSTTRKLTEQMMQEAG---VKASAMMEIGSRESIREAVLRNIG 232

Query: 241 ISIIS--EIPAKKAADAGQLKIVPIEDLD-LTRYMYLVKGKK-PRNPSAIKSFWDFVSG 295
           IS+I+  E+P        +L+++ +E+   +  Y+Y +K ++  R P+A       V+G
Sbjct: 233 ISVIARHEVPHNP-----ELRVLALENAPVMHEYLYCLKERRQARLPAAFLGVAQEVAG 286