Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 308 a.a., LysR family transcriptional regulator YfeR from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 69/298 (23%), Positives = 135/298 (45%), Gaps = 14/298 (4%)

Query: 1   MDPKISYFQTFLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLT 60
           M+  +   + F+  A+ KSFS+A  ++G++Q  VS+ +  LE+    +L  RT   V LT
Sbjct: 1   MNYSLRQLRIFITVAQAKSFSRAGDRIGLSQSAVSHSVKELERQTGVRLLDRTTREVVLT 60

Query: 61  TEGNILYENAEKLLENISNAKQQMRILHEHPEGLIRIAASTTPGEHLLPSIIKDYTKVYR 120
             G  L    E++L+ +++  +    +     G +R+AAS T   HL+P  I     +Y 
Sbjct: 61  EAGQQLATRLERVLDELNSILRDAGRVGTQLTGTVRVAASQTISAHLIPQCIAQSNSLYP 120

Query: 121 DVSFQIQITDSEKCFKLLEDRAVD---IIAVGNIYDGSYESEVIGKDRLVLVVPPDHELA 177
            + F +     +   + +    VD   +I  G   D   + E I  +  +L+   DH LA
Sbjct: 121 AIDFVLHDRPQQWVLESIRQGEVDFGIVIDPGAAVD--LQCEAILSEPFLLLCRQDHPLA 178

Query: 178 KKGVAKLSDILKEDYIDREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSE 237
            +      D+ +   + ++  SG+R +   AL    +  ++   +  +G  +++   V  
Sbjct: 179 HQEWVSWQDLKQASLVLQDYASGSRPLIDAAL---AHFAIEADIVQEIGHPATLFPMVEA 235

Query: 238 GYGISIIS--EIPAKKAADAGQLKIVPIEDLDLTRYMYLVKGKKPRNPSAIKSFWDFV 293
           G GIS++    +P  + +     ++ P+    + R + L + K     +A ++ WD V
Sbjct: 236 GIGISVLPALALPLPQGSHLQVKRLTPV----VERQLMLARRKNRSLSTAAQALWDVV 289