Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 297 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 77/294 (26%), Positives = 140/294 (47%), Gaps = 11/294 (3%)

Query: 1   MDPKISYFQTFLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLT 60
           M+ ++ + + F+  A+   F +AA +L ++Q  +S  I  LE+   A+L  RT   V LT
Sbjct: 1   MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLT 60

Query: 61  TEGNILYENAEKLLENISNAKQQMRILHEHPEGLIRIA-ASTTPGEHLLPSIIKDYTKVY 119
             G     ++ ++L  + +A  +   LH+   G +RI   S+ P    +   +  + + Y
Sbjct: 61  AAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDY 120

Query: 120 RDVSFQIQITDSEKCFKLLEDRAVDIIAVGN-IYDGSYESEVIGKDRLVLVVPPDHELAK 178
            DV  Q +  ++ +    L +  +D+  + N     S E  VI  + L+ ++P DH LA 
Sbjct: 121 PDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPESLEHAVIVHEPLMAMIPHDHPLAN 180

Query: 179 KGVAKLSDILKEDYI--DREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVS 236
                L+++ KE ++  D  VG+G  +  +  +  + Y +  + T   +G   +II  VS
Sbjct: 181 NPNVTLAELAKEPFVFFDPHVGTGLYDDILGLM--RRYHLTPVIT-QEVGEAMTIIGLVS 237

Query: 237 EGYGISIISEIPAK-KAADAGQLKIVPIEDLDLTRYMYLVKGKKPRNPSAIKSF 289
            G G+SI   +PA  K     +++ VPI + D    M+LV  K      A ++F
Sbjct: 238 AGLGVSI---LPASFKRVQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNF 288