Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 293 a.a., HTH-type transcriptional regulator CysL from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  100 bits (250), Expect = 3e-26
 Identities = 86/288 (29%), Positives = 138/288 (47%), Gaps = 15/288 (5%)

Query: 9   QTFLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLTTEGNILYE 68
           + F    K+ S ++A+  L ++Q  VS  ++ LE     QLF R  + + +   G +LY 
Sbjct: 9   EVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEHGRLLYP 68

Query: 69  NAEKLLENISNAKQQMRILHEHPEGLIRIAASTTPGEHLLPSIIKDYTKVYRDVSFQIQI 128
            A  LLE     +Q  R       G IRI AS+T G ++LP++I  Y   Y  +  ++ +
Sbjct: 69  RALALLEQAVEIEQLFR----EDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPIELSV 124

Query: 129 TDSEKCFKLLEDRAVDIIAVGNIYDGSYESEVIG----KDRLVLVVPPDHELAKKGVAKL 184
            +S+   + + D  VDI   G I    + +E+I     +D LV+   P   LA +G   L
Sbjct: 125 GNSQDVMQAVLDFRVDI---GFIEGPCHSTEIISEPWLEDELVVFAAPTSPLA-RGPVTL 180

Query: 185 SDILKEDYIDREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSEGYGISII 244
             +    +I RE GSGTREI VD L        ++   M LG++ +I  AV  G GIS +
Sbjct: 181 EQLAAAPWILRERGSGTREI-VDYLLLSHLPKFEM--AMELGNSEAIKHAVRHGLGISCL 237

Query: 245 SEIPAKKAADAGQLKIVPIEDLDLTRYMYLVKGKKPRNPSAIKSFWDF 292
           S    +    AG L  V +    L R ++ +  ++    +A++ F D+
Sbjct: 238 SRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDY 285