Pairwise Alignments

Query, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

Subject, 460 a.a., sodium:solute symporter from Pseudomonas simiae WCS417

 Score =  103 bits (256), Expect = 2e-26
 Identities = 115/520 (22%), Positives = 206/520 (39%), Gaps = 79/520 (15%)

Query: 9   IVLIYLLVIGYLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVGFGGFSG 68
           +VLIY   +  LGY G +   + EDY+V GR + P +   +  AT +  A+ VG      
Sbjct: 7   VVLIYAAGMLVLGYYGMRRAKTHEDYLVAGRNLGPSLYMGTMAATVLGGASTVGTVRLGY 66

Query: 69  LFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKFIQWFSGL 128
           + G+S  WL    +  GI    +F  K   K    L   T  ++L KR+     Q  + +
Sbjct: 67  VHGISGFWLC-AALGAGIIALNLFLAKPLLK----LKIFTVTQVLEKRYNPMARQASAVI 121

Query: 129 LIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVMYTDAFQG 188
           ++  A+ I   ++L      ++    + F +++L+   ++ VY  +GG+  +  TD  Q 
Sbjct: 122 MLAYALMIGVTSIL-AIGTVLQVLFGLPFWISVLLGGGVVVVYSTIGGMWSLTLTDIVQF 180

Query: 189 TIMFFGMLFLL--YMTYDILGGVTTAHQAISNMSGLVPANLASVGHAGWTSMPTFGSPMW 246
            I   G++F+L     Y + G           +   +PA+  S    GW ++ T+     
Sbjct: 181 VIKTVGLMFILLPICLYRVGGW--------DELVAKLPASSFSFTAIGWDTIITY----- 227

Query: 247 WTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIATGTAYVVGTLSN 306
                   +    G+L    +  R  T +  +    A      + ++      ++G  ++
Sbjct: 228 -------FMIYFFGILIGQDIWQRVFTARDEKVAKYAGTFAGFYCILYGLACALIGMAAH 280

Query: 307 VYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSLLAAAMSTISSQ 366
           V   + + V +  A +                +  ++P+    + + + LAA MST S+ 
Sbjct: 281 VLIPDLDNVNNAFAAI----------------VKMSLPDGIRGLVIAAALAAMMSTASAG 324

Query: 367 FHAQGTSIGRDVYETICGKK----GLNSVIITRLGIIVAIVIAAILGYILPGGIVARGTA 422
             A  T +  D+   + G K    G+N +     GI       A+LG  L    V     
Sbjct: 325 LLAASTVLTEDLLPRLRGGKQSSLGVNRLFTLLTGI-------AVLGIALVVNDVISALT 377

Query: 423 LFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLFCLVFIHQAESAALGISKML 482
           L + L     L      +FWKR T  GAI  +  G   +L  ++                
Sbjct: 378 LAYNLLVGGMLIPLIGAIFWKRATTSGAITSMTLGFVTALVFMI---------------- 421

Query: 483 IGRDVLISAMPWPYVDPMVISLPLAFIATVIVSLLTKAPS 522
             +D L +  P  Y      SL +  ++ V+VSLL++ P+
Sbjct: 422 --KDGLDANTPIYY------SLAVGLVSFVVVSLLSRRPA 453