Pairwise Alignments

Query, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

Subject, 552 a.a., large component of pyruvate transporter (actP-like) (from data) from Pseudomonas simiae WCS417

 Score =  105 bits (263), Expect = 3e-27
 Identities = 120/547 (21%), Positives = 220/547 (40%), Gaps = 78/547 (14%)

Query: 4   LLLNVIVLIYLLVIGYLGYKGW--KGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIV 61
           L ++ IV+  + V   L    W  K   SA DY   G KI  F   ++    ++S A+ +
Sbjct: 33  LNVSAIVMFVVFVGATLCITYWASKRNKSAADYYAAGGKITGFQNGLAIAGDYMSAASFL 92

Query: 62  GFGGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKF 121
           G        G   L +  +   +G  I      +R R    NL   TF ++ + R     
Sbjct: 93  GISALVYTSGYDGL-IYSIGFLVGWPIILFLIAERLR----NLGKYTFADVASYRLGQTQ 147

Query: 122 IQWFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVM 181
           I+  S       +  Y  A ++GA + I+    + + VA+++  I++ +YV+ GG+    
Sbjct: 148 IRSLSACGSLVVVAFYLIAQMVGAGKLIQLLFGLDYHVAVILVGILMVLYVLFGGMLATT 207

Query: 182 YTDAFQGTIMFFGMLFLLYMTYDILGGVTTAHQAI-SNMSGLVPANLASVGHAGWTSMPT 240
           +    +  ++  G  F+  M   ++  V     A+ S    + P   A +   G    P 
Sbjct: 208 WVQIIKAVLLLSGASFMALM---VMKHVNFDFNALFSEAIKVHPKGEAIMSPGGLVKDP- 263

Query: 241 FGSPMWWTIVSSIILGVGI--GVLAQPQLIVRFMTVKSNRELNRAVLIGAVFI------- 291
                    +S+  LG+ +  G    P +++RF TV   +E  ++V     FI       
Sbjct: 264 ---------ISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILT 314

Query: 292 -LIATGTAYVVGTLSNVYFMNTEGVLSIG---ATVSEAFPTGNSDSIMPLYINKAMPEWF 347
            +I  G   +V T  N  F +  G L  G   A V  A   G S                
Sbjct: 315 FIIGFGAILLVST--NPAFKDAAGALMGGNNMAAVHLANAVGGS---------------- 356

Query: 348 IYIFLVSLLAAA--MSTISSQFHAQGTSIGRDVYETICGKKGLN---SVIITRLGIIVAI 402
           I++  +S +A A  ++ ++    A  +++  D+Y ++  K   N    + ++++  I   
Sbjct: 357 IFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKANDKDEIRVSKITTIALG 416

Query: 403 VIAAILGYILPGGIVARGTALFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSL 462
           V+A  LG +     +A    L F + ++   P   L ++WK  T  GA+ G   G     
Sbjct: 417 VLAIGLGILFESQNIAFMVGLAFSIAASCNFPVLLLSMYWKNLTTRGAMIGGWLGLV--- 473

Query: 463 FCLVFIHQAESAALGISKMLIGRDVLISAMP-----WPYVDPMVISLPLAFIATVIVSLL 517
                      +A+G+  M++G  + +S +      +PY  P + S+ +AF+     S+ 
Sbjct: 474 -----------SAVGL--MVLGPTIWVSILHHEKAIFPYEYPALFSMIIAFVGIWFFSIT 520

Query: 518 TKAPSKE 524
            K+ + E
Sbjct: 521 DKSSAAE 527