Pairwise Alignments

Query, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

Subject, 554 a.a., acetate permease from Pseudomonas putida KT2440

 Score =  110 bits (275), Expect = 1e-28
 Identities = 119/556 (21%), Positives = 218/556 (39%), Gaps = 84/556 (15%)

Query: 4   LLLNVIVLIYLLVIGYLGYKGW--KGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIV 61
           L ++ I +    V   LG   W  K   SA DY   G KI  F   ++    ++S A+ +
Sbjct: 35  LNVSAIAMFVAFVAFTLGITYWASKRNKSASDYYAAGGKITGFQNGLAIAGDYMSAASFL 94

Query: 62  GFGGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKF 121
           G        G   L +  +   +G  I      +R R    NL   TF ++ + R   K 
Sbjct: 95  GISALVFTSGYDGL-IYSIGFLVGWPIILFLIAERLR----NLGKYTFADVASYRLGQKE 149

Query: 122 IQWFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVM 181
           I+  S       +  Y  A ++GA + IE    + + VA+++  I++ +YV+ GG+    
Sbjct: 150 IRTLSASGSLVVVAFYLIAQMVGAGKLIELLFGLDYHVAVILVGILMCLYVLFGGMLATT 209

Query: 182 YTDAFQGTIMFFGMLFLLYMTYDILG-----------GVTTAHQAISNMSGLVPANLASV 230
           +    +  ++  G  F+  M    +G            V    +AI +  GLV   +++ 
Sbjct: 210 WVQIIKAVLLLSGASFMALMVMKHVGFDFNTLFSEAIKVHAKGEAIMSPGGLVKDPISAF 269

Query: 231 GHAGWTSMPTFGSPMWWTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVF 290
                                S+ L +  G    P +++RF TV   +E  ++VL    F
Sbjct: 270 ---------------------SLGLALMFGTAGLPHILMRFFTVSDAKEARKSVLYATGF 308

Query: 291 I--------LIATGTAYVVGTLSNVYFMNTEGVLSIG---ATVSEAFPTGNSDSIMPLYI 339
           I        +I  G   +V T  N  F +  G L  G   A V  A   G S        
Sbjct: 309 IGYFYILTFIIGFGAILLVST--NPEFKDAAGALLGGNNMAAVHLANAVGGS-------- 358

Query: 340 NKAMPEWFIYIFLVSLLAAA--MSTISSQFHAQGTSIGRDVYETICGKKGLN---SVIIT 394
                   +++  +S +A A  ++ ++    A  +++  D+Y ++  K   N    + ++
Sbjct: 359 --------VFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVWRKGKANDKDEIRVS 410

Query: 395 RLGIIVAIVIAAILGYILPGGIVARGTALFFGLCSAAFLPAYALGLFWKRTTKEGAIAGL 454
           ++  +   V+A  LG +     +A    L F + ++   P   L ++WK+ T  GA+ G 
Sbjct: 411 KITTVALGVLAIGLGILFEKQNIAFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGG 470

Query: 455 LTGTFVSLFCLVFIHQAESAALGISKMLIGRDVLISAMPWPYVDPMVISLPLAFIATVIV 514
             G   ++  ++         LG  K +           +PY  P + S+ +AF++    
Sbjct: 471 WLGLVSAVTLMILGPTIWVQILGHEKPI-----------YPYEYPALFSMAIAFVSIWFF 519

Query: 515 SLLTKAPSKEHLKKCF 530
           S+  K+ + E  +  F
Sbjct: 520 SVTDKSKAAEDERALF 535