Pairwise Alignments

Query, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

Subject, 554 a.a., cation acetate symporter from Magnetospirillum magneticum AMB-1

 Score =  135 bits (340), Expect = 4e-36
 Identities = 124/533 (23%), Positives = 236/533 (44%), Gaps = 39/533 (7%)

Query: 6   LNVIVLIYLLVIGYLGYKGW--KGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVGF 63
           +  I + +  V+G LG   W  K T SA D+   G  I  F   ++    ++S A ++G 
Sbjct: 34  VTAIAMFFAFVMGTLGITYWASKRTKSASDFYTAGGGITGFQNGLAIAGDYMSAATLLGL 93

Query: 64  GGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKFIQ 123
                  G      T ++ F+G  I      +R R    NL   TF ++ + R +   ++
Sbjct: 94  SSMVFATGFDGFIYT-ISFFVGWPIILFLLAERLR----NLGRYTFADIASYRLDQSKVR 148

Query: 124 WFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVMYT 183
            F+ +     +  Y    ++GA + I+    + + VA+++  +++ VYV  GG+    + 
Sbjct: 149 TFAAMGSLTVVCFYLIVQMVGAGQLIKLLFGLDYAVAVIIVGVLMVVYVTFGGMIATTWV 208

Query: 184 DAFQGTIMFFGMLFLLYMTYDILGGVTTAHQAISNMSG-LVPANLASVGHAGWTSMPTFG 242
              +  ++  G + L  +     G       ++ N++   V ++ A V   G  +M    
Sbjct: 209 QIIKACLLLGGGVLLCALALSKFG------FSLENVAAKAVESHKAGVKIMGPGTM--LA 260

Query: 243 SPMWWTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIATGTAYVVG 302
            P+      S+ LG+  G  A P +++RF TV + +E  ++V + + FI        ++G
Sbjct: 261 DPV---SAVSLSLGLVFGTAALPHILMRFFTVPNAKEARKSVFVASGFIGFFFLIVCILG 317

Query: 303 TLSNVYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAM-PEWFIYIFLVSLLAAAMS 361
            L+ V  + T+     G  V      G +  +M  ++ KA+  + F+        A  ++
Sbjct: 318 -LAAVSIVGTDPQFFEGGKVGGKLLGGGNMPVM--HLAKALGGDIFLGFLSAVAFATILA 374

Query: 362 TISSQFHAQGTSIGRDVYETICGK---KGLNSVIITRLGIIVAIVIAAILGYILPGGIVA 418
            +S    A  ++I  D+Y  +  K        + +++L  +V  V+A ILG +     VA
Sbjct: 375 VVSGLALAGASAIAHDIYARVIRKGHATEAEEMRVSKLSSLVLGVVAVILGIMFEKQNVA 434

Query: 419 RGTALFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLFCLVFIHQAESAALGI 478
               L FG+ ++A  P   L ++W+  T +GA+ G + G   ++ C+V      S A+ +
Sbjct: 435 FLVGLTFGIAASANFPVLFLSMYWRGLTTKGALWGGIAGLVSAVTCVVL-----SKAVWV 489

Query: 479 SKMLIGRDVLISAMP-WPYVDPMVISLPLAFIATVIVSLLTKAPSKEHLKKCF 530
                   VL +  P +PY  P + S+ LAF+ T++VS L  + + +  K  F
Sbjct: 490 V-------VLNNPAPIFPYEHPALFSMTLAFLVTIVVSKLDGSETAKAEKALF 535