Pairwise Alignments

Query, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

Subject, 502 a.a., sodium/proline symporter PutP from Escherichia coli ECRC98

 Score =  164 bits (415), Expect = 7e-45
 Identities = 136/531 (25%), Positives = 232/531 (43%), Gaps = 66/531 (12%)

Query: 8   VIVLIYLLVIGYLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVGFGGFS 67
           V   +Y+  +  +G+  W+ T + +DY++GGR + PFV A+S GA+ +S   ++G  G  
Sbjct: 9   VTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWLLMGLPGAV 68

Query: 68  GLFGMSLLWLTFLNIFLGIFIAFVFFGKRTR-KMGHNLNALTFPELLAKRFE--SKFIQW 124
            L G+S  W+  + + LG +I +     R R    +N NALT P+    RFE  S+ ++ 
Sbjct: 69  FLSGISESWIA-IGLTLGAWINWKLVAGRLRVHTEYNNNALTLPDYFTGRFEDKSRILRI 127

Query: 125 FSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVMYTD 184
            S L+I     IY A+ ++  AR  E+T  +S++ AL   +    +Y  +GG   V +TD
Sbjct: 128 ISALVILLFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGFLAVSWTD 187

Query: 185 AFQGTIMFFGMLFLLYMTYDILGGV-----TTAHQAISNMSGLVPANLASVGHAGWTSMP 239
             Q ++M F ++    +    +GG          ++I N+  L   N  +          
Sbjct: 188 TVQASLMIFALILTPVIVIISVGGFGDSLEVIKQKSIENVDMLKGLNFVA---------- 237

Query: 240 TFGSPMWWTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIATGTAY 299
                    I+S  ++G G+G   QP ++ RFM   S+  +  A  I   ++++    A 
Sbjct: 238 ---------IIS--LMGWGLGYFGQPHILARFMAADSHHSIVHARRISMTWMILCLAGAV 286

Query: 300 VVGTLSNVYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSLLAAA 359
            VG     YF       S+   V++     N++ +           W   I L ++LAA 
Sbjct: 287 AVGFFGIAYFNEHP---SVAGAVNQ-----NAERVFIELAQILFNPWIAGILLSAILAAV 338

Query: 360 MSTISSQFHAQGTSIGRDVYETICGKKGLNS--VIITRLGIIVAIVIAAILGYILPGGIV 417
           MST+S Q     ++I  D+Y+    K       V + R+ ++V  ++A  L       ++
Sbjct: 339 MSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAANPENRVL 398

Query: 418 ARGTALFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLFCLVFIHQAESAALG 477
              +  + G   AAF P     + W R T+ GA+AG++ G       L  I   +   LG
Sbjct: 399 GLVSYAWAGF-GAAFGPVVLFSVMWSRMTRNGALAGMIIG------ALTVIVWKQFGWLG 451

Query: 478 ISKMLIGRDVLISAMPWPYVDPMVISLPLAFIATVIVSLLTKAPSKEHLKK 528
           + +++ G                        I  V+ SLL KAPS    K+
Sbjct: 452 LYEIIPG-------------------FIFGSIGIVVFSLLGKAPSAAMQKR 483