Pairwise Alignments

Query, 418 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 619 a.a., Uptake hydrogenase large subunit (EC 1.12.99.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 42/115 (36%), Positives = 65/115 (56%)

Query: 3   KVTIEPLSRLEGHGKVSITLDDAGKPTDVKLHITALRGFEQFVVGRPAEEVPRIVPRICG 62
           ++ ++P++R+EGH +  + LD      +     T  RG E  + GR   +    V RICG
Sbjct: 17  RIVVDPVTRIEGHMRCEVNLDSNNVIRNAVSTGTMWRGLEVILKGRDPRDAWAFVERICG 76

Query: 63  ICQTPHHLASVKAVDAAWGAEVPSAAEKLRELMHLGNMMHSHALHFYYLAAPDFV 117
           +C   H L SV+AV+ A G ++P  A  +RE+M     +H HA+HFY+L A D+V
Sbjct: 77  VCTGCHALTSVRAVEDALGIKIPLNAHLIREMMAKTLQVHDHAVHFYHLHALDWV 131



 Score = 28.5 bits (62), Expect = 6e-04
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 361 PKAGNGVGAIYAPRGTLFHNYETDDKGIVVKANMIVASTHN 401
           PK   GVG + APRG L H     D G +     +V +T N
Sbjct: 518 PKEAKGVGTVAAPRGMLGHWIRIKD-GKIENYQCVVPTTWN 557