Pairwise Alignments

Query, 418 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 29/157 (18%)

Query: 39  RGFEQFVVGRPAEEVPRIVPRICGICQTPHHLASVKAVDAAWGAEVPSAAEKLRELMHLG 98
           RG E+ + G+   +   +  R+CGIC   H  +  + ++     EVP  A+ LR +    
Sbjct: 40  RGIERIMEGKHYLKCIHLSERVCGICSYIHTQSFAECIENMCDIEVPEKAKYLRVITCEL 99

Query: 99  NMMHSH--ALHFYYLAAPDFVLGPDSDPAARNIIGVIGAAPEVAKKAIAMRRVGQSI--- 153
             +HSH  A   Y L      LG                        I M  V +SI   
Sbjct: 100 ERIHSHLIAAAVYNLTIEHETLG------------------------IWMLNVRESIMDL 135

Query: 154 VETIGGRAIHPVTGVPGGVSKALSEEKRDELLNEIDE 190
           +E I G  ++    V GGV   L++E  D++  +IDE
Sbjct: 136 LELITGNRVNMGFNVVGGVRLDLNKEILDKIHKKIDE 172