Pairwise Alignments

Query, 418 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 505 a.a., hydrogenase expression protein HypE from Magnetospirillum magneticum AMB-1

 Score = 48.5 bits (114), Expect = 4e-10
 Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 23/221 (10%)

Query: 39  RGFEQFVVGRPAEEVPRIVPRICGICQTPHHLASVKAVDAAWGAEVPSAAEKLRELMHLG 98
           +G E  + G P ++  RIV R+ G     + LA  +AV+AA G EVP+ A  LR +M   
Sbjct: 189 KGIEGLLQGAPLDKAARIVARVSGDSTVAYSLAFARAVEAATGCEVPARAHWLRGVM--- 245

Query: 99  NMMHSHALHFYYLAAPDFVLGPDSDPAARNIIGVIGAAPEVAKKAIAMRRVGQSIVETIG 158
             M   A H + + A        +D A   ++  +G   E   +A           + + 
Sbjct: 246 AEMERVANHVFDIGA------VCNDAAFAVMLSHMGVLREKVLRA----------NDVLF 289

Query: 159 GRAIHPVTGVPGGVSKALSEEKRDELLNEIDEMIAYGQDGIALIKSLNEKYMDLAKTLGV 218
           G  ++    VPGGVS  LS+E  + L + +       + G  L ++      D   + G+
Sbjct: 290 GHRLNMDRIVPGGVSLDLSDEGVEALKHLLYGFGKLLEQGYQLYEN-TPSLSDRTVSTGI 348

Query: 219 IDTWYLGMVKDGKHNFYGDTLRFMSPDGKQTTDFKPSEYLD 259
           + T  +   + G   F G        D ++T  + P + LD
Sbjct: 349 VQTSLIH--RFGAGGFVG-RASGRGHDARETPSYPPYDKLD 386