Pairwise Alignments

Query, 418 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 567 a.a., hydrogenase 2 large subunit from Escherichia coli ECRC62

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 115/514 (22%), Positives = 190/514 (36%), Gaps = 127/514 (24%)

Query: 3   KVTIEPLSRLEGHGKVSITLDDAGKPTDVKLHITALRGFEQFVVGRPAEEVPRIVPRICG 62
           ++TI+P++R+EGH ++   +++ G  +      T  RG E+ V  R   +   IV RICG
Sbjct: 4   RITIDPVTRIEGHLRIDCEIEN-GVVSKAWASGTMWRGMEEIVKNRDPRDAWMIVQRICG 62

Query: 63  ICQTPHHLASVKAVDAAWGAEVPSAAEKLRELMHLGNMMHSHALHFYYLAAPDFV----- 117
           +C T H L+SV+A ++A   +VP  A+ +R ++   +  H H +HFY L+A D+V     
Sbjct: 63  VCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIVHFYQLSALDWVDITSA 122

Query: 118 LGPDSDPAARNIIGV---------------------------------------IGAAPE 138
           L  D   A+  + GV                                       +   PE
Sbjct: 123 LQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVASGQLGIFANGYWGHPAMKLPPE 182

Query: 139 VAKKAIA-------MRRVGQSIVETIGGRAIHPVTGVPGGVSKALSEEKRDELLNEIDEM 191
           V   A+A        +R    +V  +GG+  H      GGV+  ++          +D +
Sbjct: 183 VNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNLAVGGVANPIN----------LDGL 232

Query: 192 IAYGQDGIALIKSLNEKYMDLAKTLGVIDT---------W---------YLGM------V 227
                + +  IKS  +K  D  + +  +DT         W         YL +       
Sbjct: 233 GVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRGKGAVNYLSVPEFPTDS 292

Query: 228 KDGKHNFYGDTLRFMSPDGKQTTDFKPSEYLDNIGEHVVGHNYV---------------- 271
           K+G   F G  +        +       EYL    +    H++                 
Sbjct: 293 KNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHSWYKDEAPQAPWEGTTIPA 352

Query: 272 --------KYPYNKKVGYPDGLYRVGPLAMLNVCDSMPTPLAEEARKDFADTFGKPANQS 323
                   KY + K   +      VGPLA + V  +      +    +    + K    +
Sbjct: 353 YDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRESTQNKLNEIVAIYQKLTGNT 412

Query: 324 L--AYNHA---RLIELLASCERVKELLED------SEITSTDIKAEVEPKAG-----NGV 367
           L  A  H+   R+I     C  ++++L++      + I   D    V+P         GV
Sbjct: 413 LEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNIGKGDHTTFVKPNIPATGEFKGV 472

Query: 368 GAIYAPRGTLFHNYETDDKGIVVKANMIVASTHN 401
           G + APRG L H     D GI+     +V ST N
Sbjct: 473 GFLEAPRGMLSHWMVIKD-GIISNYQAVVPSTWN 505