Pairwise Alignments

Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 200 a.a., RnfABCDGE type electron transport complex subunit B from Rhodanobacter sp000427505 FW510-R12

 Score = 53.1 bits (126), Expect = 6e-12
 Identities = 23/52 (44%), Positives = 30/52 (57%)

Query: 196 EEECIGCEKCVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLE 247
           E +CIGC KC +ACP   I    + +   L + C  C LCV +CPV+ I LE
Sbjct: 81  EADCIGCTKCTQACPVDAIVGASKLMHTVLADDCTGCELCVPACPVDCIVLE 132



 Score = 49.3 bits (116), Expect = 9e-11
 Identities = 31/77 (40%), Positives = 36/77 (46%), Gaps = 18/77 (23%)

Query: 134 ACGVCVPECPVDAISIEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFT 193
           ACGV  P           +A I    CI CT C+Q CP +AI  A KL           T
Sbjct: 67  ACGVEKPRM---------LARIVEADCIGCTKCTQACPVDAIVGASKL---------MHT 108

Query: 194 VNEEECIGCEKCVEACP 210
           V  ++C GCE CV ACP
Sbjct: 109 VLADDCTGCELCVPACP 125



 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 17/95 (17%)

Query: 65  LDGACQKACPVGIKKVDDRFPYSKGHCVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQE 124
           LD AC      G++K        +  C+ C KC + CP + I    K             
Sbjct: 64  LDRAC------GVEKPRMLARIVEADCIGCTKCTQACPVDAIVGASKLMHT--------- 108

Query: 125 PIAVTKDCVACGVCVPECPVDAISIEDIAVIDTDK 159
              +  DC  C +CVP CPVD I +E + +   D+
Sbjct: 109 --VLADDCTGCELCVPACPVDCIVLEPMPMEQIDQ 141



 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 128 VTKDCVACGVCVPECPVDAI--SIEDIAVIDTDKCIYCTVCSQTCPWNAI 175
           V  DC+ C  C   CPVDAI  + + +  +  D C  C +C   CP + I
Sbjct: 80  VEADCIGCTKCTQACPVDAIVGASKLMHTVLADDCTGCELCVPACPVDCI 129



 Score = 30.4 bits (67), Expect = 4e-05
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 34  CIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGA--CQKACPV 75
           CI C  C  ACP  A+V    KL+      D  G   C  ACPV
Sbjct: 84  CIGCTKCTQACPVDAIVGA-SKLMHTVLADDCTGCELCVPACPV 126



 Score = 27.3 bits (59), Expect = 4e-04
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 12/67 (17%)

Query: 306 AMCIRCGACAMKCPTGAL-KMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLELTG 364
           A CI C  C   CP  A+    K++H              C  C  CV  CP   + L  
Sbjct: 82  ADCIGCTKCTQACPVDAIVGASKLMH--------TVLADDCTGCELCVPACPVDCIVL-- 131

Query: 365 DDKMPLK 371
            + MP++
Sbjct: 132 -EPMPME 137



 Score = 26.9 bits (58), Expect = 5e-04
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 5   SIQEDACLVCNACAKACPTEAIEIAP 30
           ++  D C  C  C  ACP + I + P
Sbjct: 108 TVLADDCTGCELCVPACPVDCIVLEP 133