Pairwise Alignments

Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 211 a.a., Iron-sulfur cluster-binding protein from Variovorax sp. SCN45

 Score = 56.6 bits (135), Expect = 6e-13
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 194 VNEEECIGCEKCVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLEVEYASA 253
           ++E  CIGC  C++ACP   I    +++   +   C  C LC+  CPV+ ISLEVE    
Sbjct: 79  IDEAWCIGCTLCLDACPTDAIVGINKRMHTVIEAHCTGCELCIPVCPVDCISLEVE---- 134

Query: 254 KPVTDEGLVWSEEKCA 269
            P +     WS E+ A
Sbjct: 135 TPGSTGWQAWSAEQAA 150



 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 11/83 (13%)

Query: 140 PECPVDAISIEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEEC 199
           PEC ++      +AVID   CI CT+C   CP +AI    K         +  TV E  C
Sbjct: 66  PECGIEGPRA--MAVIDEAWCIGCTLCLDACPTDAIVGINK---------RMHTVIEAHC 114

Query: 200 IGCEKCVEACPGSMIEYNGEKLG 222
            GCE C+  CP   I    E  G
Sbjct: 115 TGCELCIPVCPVDCISLEVETPG 137



 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 20/109 (18%)

Query: 44  CPTGAL--VEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFPYSKGHCVLCEKCVEIC 101
           CP G    +E+  +L    +   LD  C    P  +  +D+ +      C+ C  C++ C
Sbjct: 42  CPPGGAEGIERLARLT-GRAPLPLDPECGIEGPRAMAVIDEAW------CIGCTLCLDAC 94

Query: 102 PAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAISIE 150
           P + I    K           +    +   C  C +C+P CPVD IS+E
Sbjct: 95  PTDAIVGINK-----------RMHTVIEAHCTGCELCIPVCPVDCISLE 132



 Score = 37.0 bits (84), Expect = 5e-07
 Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 27/75 (36%)

Query: 34  CIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFPYSKGHCVL 93
           CI C  C  ACPT A+                         VGI K        + HC  
Sbjct: 84  CIGCTLCLDACPTDAI-------------------------VGINK--RMHTVIEAHCTG 116

Query: 94  CEKCVEICPAEIISL 108
           CE C+ +CP + ISL
Sbjct: 117 CELCIPVCPVDCISL 131



 Score = 33.1 bits (74), Expect = 7e-06
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 9/58 (15%)

Query: 306 AMCIRCGACAMKCPTGAL-KMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLEL 362
           A CI C  C   CPT A+  + K +H   E        A C  C  C+ VCP   + L
Sbjct: 82  AWCIGCTLCLDACPTDAIVGINKRMHTVIE--------AHCTGCELCIPVCPVDCISL 131



 Score = 30.8 bits (68), Expect = 4e-05
 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 7/51 (13%)

Query: 6   IQEDACLVCNACAKACPTEAI-------EIAPFKTCIQCFSCATACPTGAL 49
           I E  C+ C  C  ACPT+AI              C  C  C   CP   +
Sbjct: 79  IDEAWCIGCTLCLDACPTDAIVGINKRMHTVIEAHCTGCELCIPVCPVDCI 129