Pairwise Alignments

Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 83 a.a., putative 4Fe-4S cluster-containing protein from Pseudomonas putida KT2440

 Score = 50.4 bits (119), Expect = 2e-11
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 126 IAVTKDCVACGVCVPECPVDAISI-EDIAVIDTDKCIYCT------VCSQTCPWNAIFVA 178
           + +T DC+ C VC PECP +AIS  E+I VID + C  C        C Q CP + I + 
Sbjct: 3   LIITDDCINCDVCEPECPNEAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDCIPLD 62

Query: 179 GKLPQKRQKTIKSF 192
              P+  ++ +  +
Sbjct: 63  EAHPETEEQLMAKY 76



 Score = 40.0 bits (92), Expect = 2e-08
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 11/72 (15%)

Query: 197 EECIGCEKCVEACPGSMIEYNGEKLGVKLPEACPAC------GLCVESCPVEVISLEVEY 250
           ++CI C+ C   CP   I   GE++ V  P  C  C        C + CPV+ I L+   
Sbjct: 7   DDCINCDVCEPECPNEAIS-QGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDCIPLD--- 62

Query: 251 ASAKPVTDEGLV 262
             A P T+E L+
Sbjct: 63  -EAHPETEEQLM 73



 Score = 34.3 bits (77), Expect = 1e-06
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)

Query: 308 CIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNEC------GECVDVCPQKTLE 361
           CI C  C  +CP  A+  G+ ++           P LC +C       +C  VCP   + 
Sbjct: 9   CINCDVCEPECPNEAISQGEEIY--------VIDPNLCTQCVGHYDEPQCQQVCPVDCIP 60

Query: 362 L 362
           L
Sbjct: 61  L 61



 Score = 31.6 bits (70), Expect = 8e-06
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 34 CIQCFSCATACPTGALVEKDGKLVFNGSKCDL------DGACQKACPVGIKKVDDRFP 85
          CI C  C   CP  A+ + +   V + + C        +  CQ+ CPV    +D+  P
Sbjct: 9  CINCDVCEPECPNEAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDCIPLDEAHP 66



 Score = 30.0 bits (66), Expect = 2e-05
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 16/65 (24%)

Query: 152 IAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGC------EKC 205
           +++I TD CI C VC   CP  AI    ++          + ++   C  C       +C
Sbjct: 1   MSLIITDDCINCDVCEPECPNEAISQGEEI----------YVIDPNLCTQCVGHYDEPQC 50

Query: 206 VEACP 210
            + CP
Sbjct: 51  QQVCP 55



 Score = 29.3 bits (64), Expect = 4e-05
 Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 12/53 (22%)

Query: 9  DACLVCNACAKACPTEAIE------IAPFKTCIQCF------SCATACPTGAL 49
          D C+ C+ C   CP EAI       +     C QC        C   CP   +
Sbjct: 7  DDCINCDVCEPECPNEAISQGEEIYVIDPNLCTQCVGHYDEPQCQQVCPVDCI 59



 Score = 26.2 bits (56), Expect = 3e-04
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 12/64 (18%)

Query: 91  CVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVAC---GVCVPECPVDAI 147
           C+ C+ C   CP E IS        + E I   +P   T+ CV       C   CPVD I
Sbjct: 9   CINCDVCEPECPNEAIS--------QGEEIYVIDPNLCTQ-CVGHYDEPQCQQVCPVDCI 59

Query: 148 SIED 151
            +++
Sbjct: 60  PLDE 63