Pairwise Alignments
Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Score = 137 bits (344), Expect = 9e-37
Identities = 103/388 (26%), Positives = 159/388 (40%), Gaps = 67/388 (17%)
Query: 23 TEAIEIAPFKTCIQCFS-----CATACPTGALVEKDGKLVFNGSKCDLDGACQKACPVGI 77
T+ + ++ C C + C CPT A+ DGK C G C K CP G
Sbjct: 4 TDIKKCRTYEECEDCKNKEISKCMEVCPTNAIKMIDGK----AFSCITCGTCAKECPTGA 59
Query: 78 KKVDDRFPY--SKGHCVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVAC 135
K ++ Y ++ C C C +CP +II + + + K T CV C
Sbjct: 60 IKKNEYGGYYVNRKLCTGCGICKNVCPIDIIDI--REDSTGKSY--------PTGMCVMC 109
Query: 136 GVCVPECPVDAISIEDIAVIDTDKC-----IYCTV---CSQTCPWNAIFVAGKLPQKRQK 187
G+C ECP +A D + + K Y T+ +T + + +K
Sbjct: 110 GLCTTECPYNARLYFDPSSLKNTKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVKPAERK 169
Query: 188 TIKSFTVNEEECIGCEKCVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLE 247
S +++ ++C+ C KC+ CP I + ++ + C C +C E CPV+ I
Sbjct: 170 LRHSISIDSKKCVECGKCIYLCPKDTI------IEAEMVDGCTRCNICNEVCPVDAI--- 220
Query: 248 VEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAM 307
EY E C CG C KCP +++ ++ K+ KA
Sbjct: 221 -EYGQV-----------TENCILCGNCISKCPKDVLEI---SEFKVVKTKEDVKAKPEKH 265
Query: 308 CIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLELTGDDK 367
CI CG C KCP+ AL+ E ++ + P C C CV CPQ G+
Sbjct: 266 CINCGLCVDKCPSNALRF--------ENGKILYDPKTCTLCNTCVKECPQGVRINKGEF- 316
Query: 368 MPLKGYCVMCLKCIEACNKTKKEALSLK 395
+ G CV+C CI+ C ++A+S+K
Sbjct: 317 --VDGGCVLCELCIKEC---PEDAISIK 339
Score = 136 bits (343), Expect = 1e-36
Identities = 111/448 (24%), Positives = 166/448 (37%), Gaps = 114/448 (25%)
Query: 10 ACLVCNACAKACPTEAIEIAPF-------KTCIQCFSCATACPTGAL---VEKDGKLVFN 59
+C+ C CAK CPT AI+ + K C C C CP + + GK
Sbjct: 44 SCITCGTCAKECPTGAIKKNEYGGYYVNRKLCTGCGICKNVCPIDIIDIREDSTGKSYPT 103
Query: 60 GSKCDLDGACQKACPVGIKKVDD---------------------------RFPYSK---- 88
G C + G C CP + D FP K
Sbjct: 104 G-MCVMCGLCTTECPYNARLYFDPSSLKNTKNKMLMERYSTIFKMMGKTYEFPEPKHVKI 162
Query: 89 ----------------GHCVLCEKCVEICPAEII----SLPGKAEKPKKEIIIPQEPI-- 126
CV C KC+ +CP + I + G + P + I
Sbjct: 163 VKPAERKLRHSISIDSKKCVECGKCIYLCPKDTIIEAEMVDGCTRCNICNEVCPVDAIEY 222
Query: 127 -AVTKDCVACGVCVPECPVDAISIEDIAVIDTDK---------CIYCTVCSQTCPWNAI- 175
VT++C+ CG C+ +CP D + I + V+ T + CI C +C CP NA+
Sbjct: 223 GQVTENCILCGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNALR 282
Query: 176 FVAGK-LPQKRQKTI---------KSFTVNEEE-----CIGCEKCVEACPGSMIEYNGEK 220
F GK L + T+ + +N+ E C+ CE C++ CP I
Sbjct: 283 FENGKILYDPKTCTLCNTCVKECPQGVRINKGEFVDGGCVLCELCIKECPEDAISIKERS 342
Query: 221 LGVKL-PEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCP 279
+ E C ACG C CP + I++ ++ + V + C C CAI CP
Sbjct: 343 KFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFNDNCVICEKCAIHCP 402
Query: 280 TGAIKVVNPKGLELPSKKKTEKANEFA-----MCIRCGACAMKCPTGALKMGKMVHEGKE 334
I+ N G KK ++ N + C++CG C + CP A+ G
Sbjct: 403 RDVIE--NTSG----HKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAIDKG-------- 448
Query: 335 YARVEFSPALCNECGECVDVCPQKTLEL 362
E + C C CV++CP + + +
Sbjct: 449 ----EINTEKCEYCSACVNICPTRAIRI 472
Score = 124 bits (310), Expect = 8e-33
Identities = 93/324 (28%), Positives = 130/324 (40%), Gaps = 101/324 (31%)
Query: 9 DACLVCNACAKACPTEAIEIA--------------------------------------P 30
D C CN C + CP +AIE P
Sbjct: 203 DGCTRCNICNEVCPVDAIEYGQVTENCILCGNCISKCPKDVLEISEFKVVKTKEDVKAKP 262
Query: 31 FKTCIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFPYSKGH 90
K CI C C CP+ AL ++GK++++ C L C K CP G++ ++ + G
Sbjct: 263 EKHCINCGLCVDKCPSNALRFENGKILYDPKTCTLCNTCVKECPQGVR--INKGEFVDGG 320
Query: 91 CVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAISIE 150
CVLCE C++ CP + IS+ E+ K I +E C+ACG C CP DAI++
Sbjct: 321 CVLCELCIKECPEDAISI---KERSKFTSIDKEE-------CIACGTCSMVCPNDAITV- 369
Query: 151 DIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACP 210
VID + F K+ K + + C+ CEKC CP
Sbjct: 370 ---VID----------------SLNFSGNKVHSK--------VIFNDNCVICEKCAIHCP 402
Query: 211 GSMIE-YNGEKLGVKLPEA--------CPACGLCVESCPVEVISLEVEYASAKPVTDEGL 261
+IE +G K V + C CGLC CP + I D+G
Sbjct: 403 RDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAI-------------DKGE 449
Query: 262 VWSEEKCAYCGPCAIKCPTGAIKV 285
+ + EKC YC C CPT AI++
Sbjct: 450 I-NTEKCEYCSACVNICPTRAIRI 472
Score = 120 bits (301), Expect = 8e-32
Identities = 96/347 (27%), Positives = 143/347 (41%), Gaps = 61/347 (17%)
Query: 4 ISIQEDACLVCNACAKACPTEAI-EIAPFKTCIQCFSCATACPTGALVEKDGKLVFNGSK 62
ISI C+ C C CP + I E C +C C CP A+ + G++ N
Sbjct: 174 ISIDSKKCVECGKCIYLCPKDTIIEAEMVDGCTRCNICNEVCPVDAI--EYGQVTEN--- 228
Query: 63 CDLDGACQKACPVGIKKV---------DDRFPYSKGHCVLCEKCVEICPAEIISLPGKAE 113
C L G C CP + ++ +D + HC+ C CV+ CP+ + + E
Sbjct: 229 CILCGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNAL----RFE 284
Query: 114 KPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAISIEDIAVIDTDKCIYCTVCSQTCPWN 173
K I +P K C C CV ECP + I +D C+ C +C + CP +
Sbjct: 285 NGK----ILYDP----KTCTLCNTCVKECP-QGVRINKGEFVDGG-CVLCELCIKECPED 334
Query: 174 AIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMI-------EYNGEKLGVKL- 225
AI + ++ K ++++EECI C C CP I ++G K+ K+
Sbjct: 335 AISI--------KERSKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVI 386
Query: 226 -PEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIK 284
+ C C C CP +VI + + + + C CG C I CP AI
Sbjct: 387 FNDNCVICEKCAIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAID 446
Query: 285 VVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHE 331
KG + TEK C C AC CPT A+++ + +E
Sbjct: 447 ----KG-----EINTEK------CEYCSACVNICPTRAIRIYRTWNE 478
Score = 69.3 bits (168), Expect = 2e-16
Identities = 45/136 (33%), Positives = 57/136 (41%), Gaps = 29/136 (21%)
Query: 256 VTDEGLVWSEEKCAYC-----GPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIR 310
VTD + E+C C C CPT AIK+++ K CI
Sbjct: 3 VTDIKKCRTYEECEDCKNKEISKCMEVCPTNAIKMIDGKAFS---------------CIT 47
Query: 311 CGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLELTGDD--KM 368
CG CA +CPTGA+K EY + LC CG C +VCP +++ D K
Sbjct: 48 CGTCAKECPTGAIKK-------NEYGGYYVNRKLCTGCGICKNVCPIDIIDIREDSTGKS 100
Query: 369 PLKGYCVMCLKCIEAC 384
G CVMC C C
Sbjct: 101 YPTGMCVMCGLCTTEC 116