Pairwise Alignments

Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 52 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 53.1 bits (126), Expect = 1e-12
 Identities = 24/44 (54%), Positives = 26/44 (59%)

Query: 132 CVACGVCVPECPVDAISIEDIAVIDTDKCIYCTVCSQTCPWNAI 175
           CV C  CVP CPV AIS    A IDT+ C  C VC   CP +AI
Sbjct: 7   CVGCAGCVPFCPVGAISAFGKAEIDTEMCTNCAVCKDYCPLDAI 50



 Score = 42.0 bits (97), Expect = 3e-09
 Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 13/58 (22%)

Query: 91  CVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAIS 148
           CV C  CV  CP   IS  GKAE               T+ C  C VC   CP+DAIS
Sbjct: 7   CVGCAGCVPFCPVGAISAFGKAE-------------IDTEMCTNCAVCKDYCPLDAIS 51



 Score = 38.5 bits (88), Expect = 4e-08
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)

Query: 197 EECIGCEKCVEACP-GSMIEYNGEKLGVKLPEACPACGLCVESCPVEVIS 245
           ++C+GC  CV  CP G++  +   ++     E C  C +C + CP++ IS
Sbjct: 5   DKCVGCAGCVPFCPVGAISAFGKAEIDT---EMCTNCAVCKDYCPLDAIS 51



 Score = 37.0 bits (84), Expect = 1e-07
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 9/49 (18%)

Query: 308 CIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCP 356
           C+ C  C   CP GA+           + + E    +C  C  C D CP
Sbjct: 7   CVGCAGCVPFCPVGAISA---------FGKAEIDTEMCTNCAVCKDYCP 46



 Score = 34.3 bits (77), Expect = 7e-07
 Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 11/53 (20%)

Query: 158 DKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACP 210
           DKC+ C  C   CP  AI   GK             ++ E C  C  C + CP
Sbjct: 5   DKCVGCAGCVPFCPVGAISAFGKA-----------EIDTEMCTNCAVCKDYCP 46



 Score = 32.7 bits (73), Expect = 2e-06
 Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 12/58 (20%)

Query: 266 EKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGAL 323
           +KC  C  C   CP GAI       ++      TE      MC  C  C   CP  A+
Sbjct: 5   DKCVGCAGCVPFCPVGAISAFGKAEID------TE------MCTNCAVCKDYCPLDAI 50



 Score = 30.8 bits (68), Expect = 8e-06
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 11/61 (18%)

Query: 223 VKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGA 282
           +++ + C  C  CV  CPV  IS     A  K   D       E C  C  C   CP  A
Sbjct: 1   MEILDKCVGCAGCVPFCPVGAIS-----AFGKAEID------TEMCTNCAVCKDYCPLDA 49

Query: 283 I 283
           I
Sbjct: 50  I 50



 Score = 30.8 bits (68), Expect = 8e-06
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 34 CIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPV 75
          C+ C  C   CP GA +   GK   +   C     C+  CP+
Sbjct: 7  CVGCAGCVPFCPVGA-ISAFGKAEIDTEMCTNCAVCKDYCPL 47



 Score = 30.4 bits (67), Expect = 1e-05
 Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 5/48 (10%)

Query: 9  DACLVCNACAKACPTEAIEI-----APFKTCIQCFSCATACPTGALVE 51
          D C+ C  C   CP  AI          + C  C  C   CP  A+ E
Sbjct: 5  DKCVGCAGCVPFCPVGAISAFGKAEIDTEMCTNCAVCKDYCPLDAISE 52



 Score = 28.9 bits (63), Expect = 3e-05
 Identities = 14/46 (30%), Positives = 17/46 (36%)

Query: 62  KCDLDGACQKACPVGIKKVDDRFPYSKGHCVLCEKCVEICPAEIIS 107
           KC     C   CPVG      +       C  C  C + CP + IS
Sbjct: 6   KCVGCAGCVPFCPVGAISAFGKAEIDTEMCTNCAVCKDYCPLDAIS 51