Pairwise Alignments
Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Score = 136 bits (343), Expect = 8e-37
Identities = 93/320 (29%), Positives = 137/320 (42%), Gaps = 60/320 (18%)
Query: 11 CLVCNACAKACPTEAIEIAPF----------------KTCIQCFSCATACPTGALVEKDG 54
C+ C C++ CPT AIE+ P + C+ C CA ACP
Sbjct: 32 CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDISEKCVLCGMCACACP--------- 82
Query: 55 KLVFNGSKCDLDGACQKACPVGIKKVDDRFPYSKGHCVLCEKCVEICPAEIISLPGKAEK 114
F+ K ++ P K+ ++ CVLCE+C +CP I + + E
Sbjct: 83 ---FDAVKLSINDKPITEMPQ-YPKIKRGIELNQSKCVLCEQCELVCPQCAIDV--EREV 136
Query: 115 PKKEIIIPQEPIAVTKDCVACGVCVPECPVDAI----------SIEDIA--VIDTDKCIY 162
P+++ ++ E DCV CG+C CP DAI S+ IA ID D C+Y
Sbjct: 137 PERKSLVLGEITIKKDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVY 196
Query: 163 CTVCSQTCPWNAIF-------VAGKL--PQKRQKTIKSFTVNEEECIGCEKCVEACPGSM 213
C VC + CP NAI +A K+ P+ + +++E C+ C C CP
Sbjct: 197 CKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANICPADA 256
Query: 214 IE----YNGEKLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCA 269
IE + GE + + P AC ACG C+ CP + V + +V +++ C
Sbjct: 257 IEVEKPFEGELI-IDEP-ACNACGACISVCPCNALVFPQPEKQGDKVPN--VVVNQDVCI 312
Query: 270 YCGPCAIKCPTGAIKVVNPK 289
CG C CP A+ V K
Sbjct: 313 LCGACTHSCPVDALTVKRTK 332
Score = 125 bits (314), Expect = 2e-33
Identities = 88/306 (28%), Positives = 132/306 (43%), Gaps = 47/306 (15%)
Query: 91 CVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAI--S 148
CV C C EICP I + K +I P+ + +++ CV CG+C CP DA+ S
Sbjct: 32 CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPK--LDISEKCVLCGMCACACPFDAVKLS 89
Query: 149 IEDIAV--------------IDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTV 194
I D + ++ KC+ C C CP AI V ++P+++ + T+
Sbjct: 90 INDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEITI 149
Query: 195 NEEECIGCEKCVEACPGSMIEYNGEKLG---------VKLP-EACPACGLCVESCP---V 241
+++C+ C C E CP IE + +K+ +AC C +C ++CP +
Sbjct: 150 KKDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAI 209
Query: 242 EVISLEVEYAS--AKP-----VTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELP 294
E I + AS KP + + + +E C CG CA CP AI+V P EL
Sbjct: 210 EAICYKCPLASKIKKPELYGEIKGQTNI-DKELCVSCGWCANICPADAIEVEKPFEGELI 268
Query: 295 SKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDV 354
+ C CGAC CP AL + +G + V + +C CG C
Sbjct: 269 IDEPA--------CNACGACISVCPCNALVFPQPEKQGDKVPNVVVNQDVCILCGACTHS 320
Query: 355 CPQKTL 360
CP L
Sbjct: 321 CPVDAL 326
Score = 93.6 bits (231), Expect = 8e-24
Identities = 68/270 (25%), Positives = 106/270 (39%), Gaps = 58/270 (21%)
Query: 9 DACLVCNACAKACPTEAIEIA----PF-----------------KTCIQCFSCATACPTG 47
+ C++C CA ACP +A++++ P C+ C C CP
Sbjct: 69 EKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQC 128
Query: 48 AL-VEKD---------GKLVFNGSKCDLDGACQKACP-------------VGIKKVDDRF 84
A+ VE++ G++ C L G C + CP + + + D
Sbjct: 129 AIDVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPADAIELIPNDMNALSLNPIAD-I 187
Query: 85 PYSKGHCVLCEKCVEICPAEIIS-------LPGKAEKPKKEIIIPQEPIAVTKDCVACGV 137
CV C+ C + CP I L K +KP+ I + + CV+CG
Sbjct: 188 KIDLDACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGW 247
Query: 138 CVPECPVDAISIEDI----AVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFT 193
C CP DAI +E +ID C C C CP NA+ P+K+ + +
Sbjct: 248 CANICPADAIEVEKPFEGELIIDEPACNACGACISVCPCNALVFPQ--PEKQGDKVPNVV 305
Query: 194 VNEEECIGCEKCVEACPGSMIEYNGEKLGV 223
VN++ CI C C +CP + K+ +
Sbjct: 306 VNQDVCILCGACTHSCPVDALTVKRTKINM 335
Score = 91.7 bits (226), Expect = 3e-23
Identities = 78/303 (25%), Positives = 116/303 (38%), Gaps = 83/303 (27%)
Query: 156 DTDKCIYCTVCSQTCPWNAI-----------------------------------FVAGK 180
D C+ C +CS+ CP +AI F A K
Sbjct: 28 DDCTCVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDISEKCVLCGMCACACPFDAVK 87
Query: 181 LP---------QKRQKTIKSFTVNEEECIGCEKCVEACPGSMIEYNGE----------KL 221
L + K + +N+ +C+ CE+C CP I+ E ++
Sbjct: 88 LSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEI 147
Query: 222 GVKLPEACPACGLCVESCPVEVISL---EVEYASAKPVTDEGLVWSEEKCAYCGPCAIKC 278
+K + C CG+C E CP + I L ++ S P+ D + + C YC C C
Sbjct: 148 TIK-KDDCVLCGICAEYCPADAIELIPNDMNALSLNPIAD--IKIDLDACVYCKVCEKAC 204
Query: 279 PTGAIKVVNPKGLELPSKKKTEKANEF--------AMCIRCGACAMKCPTGALKMGKMVH 330
P AI+ + K KK E E +C+ CG CA CP A+++ K
Sbjct: 205 PHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANICPADAIEVEK-PF 263
Query: 331 EGKEYARVEFSPALCNECGECVDVCPQKTL-----ELTGDDKMP----LKGYCVMCLKCI 381
EG+ + CN CG C+ VCP L E G DK+P + C++C C
Sbjct: 264 EGE----LIIDEPACNACGACISVCPCNALVFPQPEKQG-DKVPNVVVNQDVCILCGACT 318
Query: 382 EAC 384
+C
Sbjct: 319 HSC 321
Score = 89.0 bits (219), Expect = 2e-22
Identities = 62/211 (29%), Positives = 89/211 (42%), Gaps = 60/211 (28%)
Query: 1 LAGISIQEDACLVCNACAKACPTEAIEIAP-----------------FKTCIQCFSCATA 43
L I+I++D C++C CA+ CP +AIE+ P C+ C C A
Sbjct: 144 LGEITIKKDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKA 203
Query: 44 CPTGALVEKDGKLVFNGSKCDLDGACQKACPVGIK-KVDDRFPYSKGH-------CVLCE 95
CP A ++ C K CP+ K K + + KG CV C
Sbjct: 204 CPHNA----------------IEAICYK-CPLASKIKKPELYGEIKGQTNIDKELCVSCG 246
Query: 96 KCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAISIED---- 151
C ICPA+ I + EKP + +I EP C ACG C+ CP +A+
Sbjct: 247 WCANICPADAI----EVEKPFEGELIIDEPA-----CNACGACISVCPCNALVFPQPEKQ 297
Query: 152 -----IAVIDTDKCIYCTVCSQTCPWNAIFV 177
V++ D CI C C+ +CP +A+ V
Sbjct: 298 GDKVPNVVVNQDVCILCGACTHSCPVDALTV 328
Score = 85.1 bits (209), Expect = 3e-21
Identities = 57/184 (30%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 229 CPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKV-VN 287
C CG+C E CP I + A K D + EKC CG CA CP A+K+ +N
Sbjct: 32 CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDISEKCVLCGMCACACPFDAVKLSIN 91
Query: 288 PKGL-ELPSKKKTEKANEF--AMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPAL 344
K + E+P K ++ E + C+ C C + CP A+ + + V E K E +
Sbjct: 92 DKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEITIKK 151
Query: 345 --CNECGECVDVCPQKTLELTGDDKMPLK-----------GYCVMCLKCIEACNKTKKEA 391
C CG C + CP +EL +D L CV C C +AC EA
Sbjct: 152 DDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAIEA 211
Query: 392 LSLK 395
+ K
Sbjct: 212 ICYK 215
Score = 64.3 bits (155), Expect = 5e-15
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 261 LVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPT 320
L W + C CG C+ CPT AI+ + P G K + C+ CG CA CP
Sbjct: 25 LKWDDCTCVGCGICSEICPTSAIE-MGPLGAIFKGDIDAPKLDISEKCVLCGMCACACPF 83
Query: 321 GALKMG---KMVHEGKEYAR----VEFSPALCNECGECVDVCPQKTLELTGD--DKMPL- 370
A+K+ K + E +Y + +E + + C C +C VCPQ +++ + ++ L
Sbjct: 84 DAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLV 143
Query: 371 -------KGYCVMCLKCIEAC 384
K CV+C C E C
Sbjct: 144 LGEITIKKDDCVLCGICAEYC 164
Score = 33.1 bits (74), Expect = 1e-05
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Query: 332 GKEYARVEFSPALCNECGECVDVCPQKTLEL-------TGD---DKMPLKGYCVMCLKCI 381
G E +++ C CG C ++CP +E+ GD K+ + CV+C C
Sbjct: 19 GVEKRVLKWDDCTCVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDISEKCVLCGMCA 78
Query: 382 EAC 384
AC
Sbjct: 79 CAC 81