Pairwise Alignments

Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 159 a.a., 4Fe-4S dicluster domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 58.9 bits (141), Expect = 9e-14
 Identities = 44/150 (29%), Positives = 59/150 (39%), Gaps = 37/150 (24%)

Query: 190 KSFTVNEEECIGCEKCVEACPGSMIE-YNGEKLGVKL----------PEACPACGL--CV 236
           KS  +   +C GC +C  AC       +N  K  +++          P  C  C    C+
Sbjct: 3   KSLLIQPAKCTGCRQCEMACSFEKERSFNPSKSRIRVFDIHSEARFVPYTCTQCAQAWCL 62

Query: 237 ESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSK 296
           ++CPV+ I ++     AK V D         C  C  C I CP G I  V   G      
Sbjct: 63  QACPVDAIGIDA-VTRAKVVNDN-------ICVGCKVCTIACPFGTINYVADSG------ 108

Query: 297 KKTEKANEFAMCIRCG---ACAMKCPTGAL 323
                  + A C  CG   ACA  CPTGA+
Sbjct: 109 -------KVAKCDLCGGDPACAKACPTGAI 131



 Score = 49.3 bits (116), Expect = 7e-11
 Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 20/134 (14%)

Query: 91  CVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGV--CVPECPVDAIS 148
           C  C +C   C  E       ++   +   I  E   V   C  C    C+  CPVDAI 
Sbjct: 12  CTGCRQCEMACSFEKERSFNPSKSRIRVFDIHSEARFVPYTCTQCAQAWCLQACPVDAIG 71

Query: 149 IEDIA---VIDTDKCIYCTVCSQTCPWNAI-FVA--GKLPQKRQKTIKSFTVNEEECIGC 202
           I+ +    V++ + C+ C VC+  CP+  I +VA  GK+ +             + C G 
Sbjct: 72  IDAVTRAKVVNDNICVGCKVCTIACPFGTINYVADSGKVAKC------------DLCGGD 119

Query: 203 EKCVEACPGSMIEY 216
             C +ACP   I Y
Sbjct: 120 PACAKACPTGAITY 133



 Score = 47.0 bits (110), Expect = 4e-10
 Identities = 41/146 (28%), Positives = 56/146 (38%), Gaps = 28/146 (19%)

Query: 154 VIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEE------CIGCEK--C 205
           +I   KC  C  C   C     F   +     +  I+ F ++ E       C  C +  C
Sbjct: 6   LIQPAKCTGCRQCEMACS----FEKERSFNPSKSRIRVFDIHSEARFVPYTCTQCAQAWC 61

Query: 206 VEACPGSMIEYNG-EKLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWS 264
           ++ACP   I  +   +  V     C  C +C  +CP   I+          V D G V  
Sbjct: 62  LQACPVDAIGIDAVTRAKVVNDNICVGCKVCTIACPFGTINY---------VADSGKV-- 110

Query: 265 EEKCAYCG---PCAIKCPTGAIKVVN 287
             KC  CG    CA  CPTGAI  V+
Sbjct: 111 -AKCDLCGGDPACAKACPTGAITYVD 135



 Score = 47.0 bits (110), Expect = 4e-10
 Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 17/73 (23%)

Query: 17  CAKACPTEAI--------EIAPFKTCIQCFSCATACPTGAL--VEKDGKLVFNGSKCDL- 65
           C +ACP +AI        ++     C+ C  C  ACP G +  V   GK+    +KCDL 
Sbjct: 61  CLQACPVDAIGIDAVTRAKVVNDNICVGCKVCTIACPFGTINYVADSGKV----AKCDLC 116

Query: 66  --DGACQKACPVG 76
             D AC KACP G
Sbjct: 117 GGDPACAKACPTG 129



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 42/162 (25%), Positives = 56/162 (34%), Gaps = 33/162 (20%)

Query: 6   IQEDACLVCNACAKACPTEAIE-IAPFKTCIQCFSCATACPTGALVEKDGKLV-FNGSKC 63
           IQ   C  C  C  AC  E      P K+ I+ F           +  + + V +  ++C
Sbjct: 7   IQPAKCTGCRQCEMACSFEKERSFNPSKSRIRVFD----------IHSEARFVPYTCTQC 56

Query: 64  DLDGACQKACPV---GIKKVDDRFPYSKGHCVLCEKCVEICPAEIISLPGKAEKPKKEII 120
                C +ACPV   GI  V      +   CV C+ C   CP   I+    + K  K   
Sbjct: 57  -AQAWCLQACPVDAIGIDAVTRAKVVNDNICVGCKVCTIACPFGTINYVADSGKVAK--- 112

Query: 121 IPQEPIAVTKDCVACG---VCVPECPVDAISIEDIAVIDTDK 159
                      C  CG    C   CP  AI+  D      DK
Sbjct: 113 -----------CDLCGGDPACAKACPTGAITYVDAEQTGYDK 143