Pairwise Alignments

Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 180 a.a., Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%)

Query: 226 PEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEE--KCAYCGPCAIKCPTGAI 283
           P+ C  C  CV +CP   +++E + A+ +      L W     +C +CG C   CPT AI
Sbjct: 37  PQQCIGCAACVNACPSNALTVETDLATNE------LAWQFNLGRCIFCGRCEEVCPTAAI 90

Query: 284 KVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALK-----MGKMVHEGKEYA-- 336
           K+     L +  K+   + + FA+C  C  C    P    K     +  + H G   A  
Sbjct: 91  KLSQEYELAVWKKEDFLQQSRFALC-NCRVC--NRPFAVQKEIDYAIALLAHNGDSRAEN 147

Query: 337 -RVEFSPALCNECGECVDVCPQKTLELT 363
            R  F    C +C     + P   +ELT
Sbjct: 148 HRESFE--TCPDCKRQKCLVPSDRIELT 173



 Score = 46.6 bits (109), Expect = 5e-10
 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 195 NEEECIGCEKCVEACPGSMIEYNGEKLGVKLP-----EACPACGLCVESCPVEVISLEVE 249
           N ++CIGC  CV ACP + +    +    +L        C  CG C E CP   I L  E
Sbjct: 36  NPQQCIGCAACVNACPSNALTVETDLATNELAWQFNLGRCIFCGRCEEVCPTAAIKLSQE 95

Query: 250 YASAKPVTDEGLVWSEEKCAYCGPC 274
           Y  A    ++ L  S      C  C
Sbjct: 96  YELAVWKKEDFLQQSRFALCNCRVC 120



 Score = 46.2 bits (108), Expect = 7e-10
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 18/72 (25%)

Query: 122 PQEPIAVTKD-----------CVACGVCVPECPVDAISIE-DIAV------IDTDKCIYC 163
           P EPIAV K+           C+ C  CV  CP +A+++E D+A        +  +CI+C
Sbjct: 19  PLEPIAVDKNFRGKPEHNPQQCIGCAACVNACPSNALTVETDLATNELAWQFNLGRCIFC 78

Query: 164 TVCSQTCPWNAI 175
             C + CP  AI
Sbjct: 79  GRCEEVCPTAAI 90



 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 13/94 (13%)

Query: 54  GKLVFNGSKCDLDGACQKACPVGIKKVDD-------RFPYSKGHCVLCEKCVEICPAEII 106
           GK   N  +C    AC  ACP     V+         + ++ G C+ C +C E+CP   I
Sbjct: 31  GKPEHNPQQCIGCAACVNACPSNALTVETDLATNELAWQFNLGRCIFCGRCEEVCPTAAI 90

Query: 107 SLPGKAEKP--KKEIIIPQEPIAVTKDCVACGVC 138
            L  + E    KKE  + Q   A+      C VC
Sbjct: 91  KLSQEYELAVWKKEDFLQQSRFALCN----CRVC 120



 Score = 39.3 bits (90), Expect = 9e-08
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 8/94 (8%)

Query: 130 KDCVACGVCVPECPVDAISIEDI----AVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKR 185
           K  +  G      P++ I+++         +  +CI C  C   CP NA+ V   L    
Sbjct: 6   KKVIKTGTATSSYPLEPIAVDKNFRGKPEHNPQQCIGCAACVNACPSNALTVETDLATNE 65

Query: 186 QKTIKSFTVNEEECIGCEKCVEACPGSMIEYNGE 219
                ++  N   CI C +C E CP + I+ + E
Sbjct: 66  ----LAWQFNLGRCIFCGRCEEVCPTAAIKLSQE 95



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 12/51 (23%)

Query: 11 CLVCNACAKACPTEAIEIAP------------FKTCIQCFSCATACPTGAL 49
          C+ C AC  ACP+ A+ +                 CI C  C   CPT A+
Sbjct: 40 CIGCAACVNACPSNALTVETDLATNELAWQFNLGRCIFCGRCEEVCPTAAI 90



 Score = 33.5 bits (75), Expect = 5e-06
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 6/52 (11%)

Query: 339 EFSPALCNECGECVDVCPQKTLELTGD---DKMPLK---GYCVMCLKCIEAC 384
           E +P  C  C  CV+ CP   L +  D   +++  +   G C+ C +C E C
Sbjct: 34  EHNPQQCIGCAACVNACPSNALTVETDLATNELAWQFNLGRCIFCGRCEEVC 85