Pairwise Alignments

Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 180 a.a., NADH-quinone oxidoreductase, chain I from Enterobacter asburiae PDN3

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 15/85 (17%)

Query: 102 PAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAISIEDIAVID----- 156
           P E + LP +    +  I++ ++P   ++ CVAC +C   CPV  IS++    +D     
Sbjct: 34  PEEPVYLPPRY---RGRIVLTRDPDG-SERCVACNLCAVACPVGCISLQKAETVDGRWYP 89

Query: 157 ------TDKCIYCTVCSQTCPWNAI 175
                   +CI+C +C + CP  AI
Sbjct: 90  EFFRINFSRCIFCGLCEEACPTTAI 114



 Score = 45.1 bits (105), Expect = 2e-09
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 15/125 (12%)

Query: 266 EKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKM 325
           E+C  C  CA+ CP G I +   + ++     +  + N F+ CI CG C   CPT A+++
Sbjct: 58  ERCVACNLCAVACPVGCISLQKAETVDGRWYPEFFRIN-FSRCIFCGLCEEACPTTAIQL 116

Query: 326 GKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLELTGDDKMPLKGYCVMCLKCIEACN 385
                 G EY R +              V  ++ L ++G  K P   +  M    I+  +
Sbjct: 117 TPDFELG-EYKRQDL-------------VYEKEDLLISGPGKYPEYNFYRMAGMAIDGKD 162

Query: 386 KTKKE 390
           K + E
Sbjct: 163 KGEAE 167



 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 12/65 (18%)

Query: 227 EACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSE------EKCAYCGPCAIKCPT 280
           E C AC LC  +CPV  ISL+      K  T +G  + E       +C +CG C   CPT
Sbjct: 58  ERCVACNLCAVACPVGCISLQ------KAETVDGRWYPEFFRINFSRCIFCGLCEEACPT 111

Query: 281 GAIKV 285
            AI++
Sbjct: 112 TAIQL 116



 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 14/117 (11%)

Query: 197 EECIGCEKCVEACPGSMIEYNGEKL--GVKLPE-------ACPACGLCVESCPVEVISLE 247
           E C+ C  C  ACP   I     +   G   PE        C  CGLC E+CP   I L 
Sbjct: 58  ERCVACNLCAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLT 117

Query: 248 VEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANE 304
            ++   +    + LV+ +E     GP   K P          G+ +  K K E  NE
Sbjct: 118 PDFELGE-YKRQDLVYEKEDLLISGPG--KYP--EYNFYRMAGMAIDGKDKGEAENE 169



 Score = 39.3 bits (90), Expect = 9e-08
 Identities = 17/59 (28%), Positives = 29/59 (49%)

Query: 157 TDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMIE 215
           +++C+ C +C+  CP   I +        +   + F +N   CI C  C EACP + I+
Sbjct: 57  SERCVACNLCAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQ 115



 Score = 37.7 bits (86), Expect = 3e-07
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 16/57 (28%)

Query: 9   DACLVCNACAKACPTEAIEIAP----------------FKTCIQCFSCATACPTGAL 49
           + C+ CN CA ACP   I +                  F  CI C  C  ACPT A+
Sbjct: 58  ERCVACNLCAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGLCEEACPTTAI 114



 Score = 37.0 bits (84), Expect = 4e-07
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 21/99 (21%)

Query: 34  CIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFPYSKGHCVL 93
           C+ C  CA ACP G +                  + QKA  V  +   + F  +   C+ 
Sbjct: 60  CVACNLCAVACPVGCI------------------SLQKAETVDGRWYPEFFRINFSRCIF 101

Query: 94  CEKCVEICPAEIISLPGK---AEKPKKEIIIPQEPIAVT 129
           C  C E CP   I L       E  +++++  +E + ++
Sbjct: 102 CGLCEEACPTTAIQLTPDFELGEYKRQDLVYEKEDLLIS 140



 Score = 35.8 bits (81), Expect = 1e-06
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 83  RFPYSKGHCVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPEC 142
           R P     CV C  C   CP   ISL  KAE            I  ++ C+ CG+C   C
Sbjct: 52  RDPDGSERCVACNLCAVACPVGCISLQ-KAETVDGRWYPEFFRINFSR-CIFCGLCEEAC 109

Query: 143 PVDAISI 149
           P  AI +
Sbjct: 110 PTTAIQL 116



 Score = 31.6 bits (70), Expect = 2e-05
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 11  CLVCNACAKACPTEAIEIAP 30
           C+ C  C +ACPT AI++ P
Sbjct: 99  CIFCGLCEEACPTTAIQLTP 118