Pairwise Alignments

Query, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 192 a.a., electron transport complex subunit RsxB from Escherichia coli ECRC62

 Score = 54.3 bits (129), Expect = 3e-12
 Identities = 21/54 (38%), Positives = 30/54 (55%)

Query: 194 VNEEECIGCEKCVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLE 247
           ++E  CIGC KC++ACP   I      +   + + C  C LCV+ CP   ISL+
Sbjct: 112 IDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQ 165



 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 9/59 (15%)

Query: 152 IAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACP 210
           +AVID + CI CT C Q CP +AI  A         T    TV  + C GC  CV+ CP
Sbjct: 109 VAVIDENNCIGCTKCIQACPVDAIVGA---------TRAMHTVMSDLCTGCNLCVDPCP 158



 Score = 45.1 bits (105), Expect = 2e-09
 Identities = 36/143 (25%), Positives = 55/143 (38%), Gaps = 32/143 (22%)

Query: 27  EIAPFKTCIQC-------FSCATAC---------PTGALVEKDGKLVFNGSKCDLDGACQ 70
           EI P   C QC       ++ A +C         P G  V      + N     LDG  Q
Sbjct: 42  EILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQ 101

Query: 71  KACPVGIKKVDDRFPYSKGHCVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTK 130
           +  P  +  V D     + +C+ C KC++ CP + I    +A               ++ 
Sbjct: 102 ELTPARMVAVID-----ENNCIGCTKCIQACPVDAIVGATRAMHT-----------VMSD 145

Query: 131 DCVACGVCVPECPVDAISIEDIA 153
            C  C +CV  CP   IS++ +A
Sbjct: 146 LCTGCNLCVDPCPTHCISLQPVA 168



 Score = 43.1 bits (100), Expect = 6e-09
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%)

Query: 96  KCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKD--CVACGVCVPECPVDAI--SIED 151
           K  E+   E   L G+A++     + P   +AV  +  C+ C  C+  CPVDAI  +   
Sbjct: 84  KIAELLNVEPQPLDGEAQE-----LTPARMVAVIDENNCIGCTKCIQACPVDAIVGATRA 138

Query: 152 IAVIDTDKCIYCTVCSQTCPWNAI 175
           +  + +D C  C +C   CP + I
Sbjct: 139 MHTVMSDLCTGCNLCVDPCPTHCI 162



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 37/150 (24%), Positives = 53/150 (35%), Gaps = 29/150 (19%)

Query: 219 EKLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPC--AI 276
           EK+   LP++   CG C              Y   +P   E +  + EK   C P   A+
Sbjct: 38  EKIDEILPQS--QCGQC-------------GYPGCRPYA-EAISCNGEKINRCAPGGEAV 81

Query: 277 KCPTGAIKVVNPKGLELPSKKKTEKANEFAM----CIRCGACAMKCPTGALKMGKMVHEG 332
                 +  V P+ L+  +++ T       +    CI C  C   CP  A+        G
Sbjct: 82  MLKIAELLNVEPQPLDGEAQELTPARMVAVIDENNCIGCTKCIQACPVDAIV-------G 134

Query: 333 KEYARVEFSPALCNECGECVDVCPQKTLEL 362
              A       LC  C  CVD CP   + L
Sbjct: 135 ATRAMHTVMSDLCTGCNLCVDPCPTHCISL 164



 Score = 33.5 bits (75), Expect = 5e-06
 Identities = 25/94 (26%), Positives = 30/94 (31%), Gaps = 27/94 (28%)

Query: 22  PTEAIEIAPFKTCIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPVGIKKVD 81
           P   + +     CI C  C  ACP  A+V                GA +    V      
Sbjct: 105 PARMVAVIDENNCIGCTKCIQACPVDAIV----------------GATRAMHTV------ 142

Query: 82  DRFPYSKGHCVLCEKCVEICPAEIISLPGKAEKP 115
                    C  C  CV+ CP   ISL   AE P
Sbjct: 143 -----MSDLCTGCNLCVDPCPTHCISLQPVAETP 171



 Score = 30.8 bits (68), Expect = 3e-05
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 5   SIQEDACLVCNACAKACPTEAIEIAP 30
           ++  D C  CN C   CPT  I + P
Sbjct: 141 TVMSDLCTGCNLCVDPCPTHCISLQP 166



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 6/36 (16%)

Query: 349 GECVDVCPQKTLELTGDDKMPLKGYCVMCLKCIEAC 384
           GE  ++ P + + +  ++       C+ C KCI+AC
Sbjct: 98  GEAQELTPARMVAVIDENN------CIGCTKCIQAC 127