Pairwise Alignments

Query, 222 a.a., HisA/HisF family protein from Methanococcus maripaludis S2

Subject, 242 a.a., 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino] imidazole-4-carboxamide isomerase from Xanthobacter sp. DMC5

 Score = 53.1 bits (126), Expect = 4e-12
 Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 31/240 (12%)

Query: 3   IIPVIDLMDGLAVSGKSGNRKEYVPIKSVLCDSSNPIDLITKYKENGAKKVYIADLN-SI 61
           + P IDL DGLAV  + G+             + +P     +++  G + +++ DL+ + 
Sbjct: 3   LFPAIDLKDGLAVRLEQGDMARATVF------NRDPAAQAEEFENLGFRYLHLVDLDGAF 56

Query: 62  MGTGDNF----EIVKNLDIFKIVDFGVTDKKDLEN-VKKYAEMTILGTETLNDISILKEE 116
            G   N      I++ + I   +  G+ D + +E  ++K     ILGT  + D   +K  
Sbjct: 57  AGKPVNAAAVDRILETVSIPVQLGGGIRDMRTVEGWLEKGVTRVILGTAAVRDPDFVKAA 116

Query: 117 ------NIILSLDFKDGKLLNYDLDEI--LSEIDKK--------TPLIILDISSVGTQKG 160
                  I++ LD +DG++      E   L+ +D            +I  DI+  G  KG
Sbjct: 117 AKAHPGRIVVGLDARDGRVAVEGWAETSDLAAVDIARRFEDAGVAAIIYTDIARDGLLKG 176

Query: 161 INVELIKDILERTDNPIYIGGGIKSEDDLKISKELG---ISGVLIGTTIHNGKLDLKKII 217
           +N+E    + E    P+   GG+ S  D++     G   + G + G  +++G+LD ++ +
Sbjct: 177 LNLEATIALAEAISLPVIASGGLASLADIEGLLAPGAKKLEGAITGRALYDGRLDPREAL 236