Pairwise Alignments

Query, 222 a.a., HisA/HisF family protein from Methanococcus maripaludis S2

Subject, 245 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Pseudomonas simiae WCS417

 Score = 75.1 bits (183), Expect = 1e-18
 Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 32/239 (13%)

Query: 1   MEIIPVIDLMDGLAVSGKSGNRKEYVPIKSVLCDSSNPIDLITKYKENGAKKVYIADLNS 60
           M IIP IDL DG  V  + G  ++          S +P+ +  K+ E G +++++ DLN 
Sbjct: 1   MLIIPAIDLKDGACVRLRQGRMEDSTVF------SDDPVSMAAKWVEGGCRRLHLVDLNG 54

Query: 61  IM-GTGDNFEIV----KNLDIFKI-VDFGVTDKKDLEN-VKKYAEMTILGTETLNDISIL 113
              G   N E+V    K      I +  G+   + +E+ VK      I+GT+ + D + +
Sbjct: 55  AFEGQPVNGEVVTAIAKRYPSLPIQIGGGIRSLETIEHYVKAGVSYVIIGTKAVKDPAFV 114

Query: 114 KEE------NIILSLDFKDGKLLNYDLDEILS----------EIDKKTPLIILDISSVGT 157
            E        +I+ LD KDG +      EI +          E D  + ++  DI+  G 
Sbjct: 115 AEACRAFPGKVIVGLDAKDGFVATDGWAEISTVQVIDLAKQFEADGVSAIVYTDIAKDGM 174

Query: 158 QKGINVELIKDILERTDNPIYIGGGIKSEDDLKI---SKELGISGVLIGTTIHNGKLDL 213
            +G NV     +   T  P+   GGI +  D+K    +K  GI G + G  I+ G LD+
Sbjct: 175 MQGCNVPFTAALAAATKIPVIASGGIHNLGDIKSLLDAKAPGIIGAITGRAIYEGTLDV 233