Pairwise Alignments

Query, 333 a.a., RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 from Methanococcus maripaludis S2

Subject, 308 a.a., tRNA pseudouridine(55) synthase TruB from Rhodanobacter sp000427505 FW510-R12

 Score = 99.8 bits (247), Expect = 8e-26
 Identities = 76/265 (28%), Positives = 115/265 (43%), Gaps = 40/265 (15%)

Query: 31  GLVVIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPVALGNTTKCVPIWHIP 90
           G+V++DKP G +S++    VR +L   K GH G LDP  TG LP+  G  TK        
Sbjct: 14  GIVLLDKPPGLSSNQALQAVRRLLRASKGGHTGALDPLATGLLPLCFGEATKLAGSLLGA 73

Query: 91  PKEYVCLMHLHDDAELVD------------------IENIFKEFTGRIHQRPPLKAAVKR 132
            K Y+    L    +  D                  +E       GRI Q PP+ +A+K+
Sbjct: 74  RKAYLAECRLGVTTDTADSEGEVVQQRPVPELDDARVEAALARLRGRIQQVPPMYSALKQ 133

Query: 133 -----------------SLRIRKIYEIEILEIDGRDILFRTKCQSGTYLRKLVDDMGEAL 175
                            + R   ++ +E+L  +G  +    +C SGTY+R L  D+GE L
Sbjct: 134 GGERLYAKARRGETVELAPREVAVHRLELLAREGDTLQLLVECGSGTYVRSLAVDLGEDL 193

Query: 176 GTSAHMQELRRTISGPFYENEAVYLQDLLDAYIFWKEDGNEEELRKIVKPLEYGLQHLKK 235
           G  AH+  LRR    PF E   V L  L  A     E G+E  L  ++ P+  GL  L  
Sbjct: 194 GCGAHLTALRRIWVEPFREPRMVTLTQLEQA----AEQGDEALLAWLL-PVSAGLSDLPV 248

Query: 236 IIIKDSAVDAVCHGATLYSSGISKI 260
           + + ++   A+  G  +   G+ ++
Sbjct: 249 LRLDETQSMAISRGQQIALPGLPEV 273