Pairwise Alignments

Query, 333 a.a., RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 from Methanococcus maripaludis S2

Subject, 311 a.a., tRNA pseudouridine(55) synthase TruB from Magnetospirillum magneticum AMB-1

 Score = 96.7 bits (239), Expect = 7e-25
 Identities = 71/212 (33%), Positives = 98/212 (46%), Gaps = 39/212 (18%)

Query: 31  GLVVIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPVALGNTTKCVPIWHIP 90
           G + IDKP G  S +V A V+ +LN  K GHGGTLDP  +G LP+ALG  TK V      
Sbjct: 12  GWLAIDKPLGIGSTQVVAKVKRLLNAAKVGHGGTLDPLASGILPIALGEATKTVQYVMDG 71

Query: 91  PKEYVCLMHLHD-------DAELVD----------IENIFKEFTGRIHQRPPLKAAVKRS 133
            K Y   +   +       ++E+++          I      F G I Q PP  +A+K  
Sbjct: 72  SKTYRFQVRWGEATASCDRESEVIETSPHRPTAEAIAAALPAFLGEIDQIPPAYSAIK-- 129

Query: 134 LRIRKIYEI----EILEIDGRDIL----------------FRTKCQSGTYLRKLVDDMGE 173
           +  ++ Y++    E +EI  R +                 F   C  GTY+R L  D+  
Sbjct: 130 IDGQRAYDLARAGEEVEIKPRRVAIKSFTLLGQPDADHADFEVHCGKGTYVRSLARDLSL 189

Query: 174 ALGTSAHMQELRRTISGPFYENEAVYLQDLLD 205
           ALGT  H+  LRR   GPF E  A+ L+ L D
Sbjct: 190 ALGTVGHVSVLRRIACGPFNEQNAISLESLED 221