Pairwise Alignments

Query, 333 a.a., RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 from Methanococcus maripaludis S2

Subject, 314 a.a., tRNA pseudouridine(55) synthase TruB from Erwinia tracheiphila SCR3

 Score = 83.6 bits (205), Expect = 6e-21
 Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 34/190 (17%)

Query: 31  GLVVIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPVALGNTTKCVPIWHIP 90
           G++++DKP G +S++    V+ +    +AGH G LDP  TG LP+ LG  TK        
Sbjct: 13  GVLLLDKPQGLSSNDALQKVKRLFAANRAGHTGALDPLATGMLPICLGEATKFSRYLLDS 72

Query: 91  PKEYVCLMHLHDDAELVD-----------------IENIFKEFTGRIHQRPPLKAAVK-- 131
            K Y  +  L    +  D                 ++     F G   Q P + +A+K  
Sbjct: 73  DKRYRVIARLGQRTDTSDSDGKIICECPLNFTQQQLDEAIDRFRGETQQVPSMYSALKYQ 132

Query: 132 ---------------RSLRIRKIYEIEILEIDGRDILFRTKCQSGTYLRKLVDDMGEALG 176
                          R  R   +YE+  +  +G ++     C  GTY+R ++DD+G+ LG
Sbjct: 133 GRKLYEYAREGIAVPRESRSIVVYELAFIRCEGDELELEIHCSKGTYIRTIIDDLGDMLG 192

Query: 177 TSAHMQELRR 186
             AH+  LRR
Sbjct: 193 CGAHVIYLRR 202