Pairwise Alignments

Query, 333 a.a., RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 from Methanococcus maripaludis S2

Subject, 316 a.a., tRNA pseudouridine(55) synthase from Enterobacter asburiae PDN3

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 34/207 (16%)

Query: 31  GLVVIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPVALGNTTKCVPIWHIP 90
           G++++DKP G +S++V   V+ + N  +AGH G LDP  TG LPV LG  TK        
Sbjct: 13  GVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPVCLGEATKFSQYLLDS 72

Query: 91  PKEYVCLMHLHD-------DAELVD----------IENIFKEFTGRIHQRPPLKAAVK-- 131
            K Y  +  L         D ++V+          ++   + F G   Q P + +A+K  
Sbjct: 73  DKRYRVIAKLGQRTDTSDADGQVVEERPVTFSAEQLDAALESFRGDTMQVPSMYSALKYQ 132

Query: 132 ---------------RSLRIRKIYEIEILEIDGRDILFRTKCQSGTYLRKLVDDMGEALG 176
                          R  R   +YE+  +  +G ++     C  GTY+R ++DD+GE LG
Sbjct: 133 GKKLYEYARQGIDVPREARPITVYELLFIRHEGDELELEVHCSKGTYIRTIIDDLGEKLG 192

Query: 177 TSAHMQELRRTISGPFYENEAVYLQDL 203
             AH+  LRR     +     V L+ L
Sbjct: 193 CGAHVIYLRRLAVSKYPVERMVTLEQL 219