Pairwise Alignments

Query, 333 a.a., RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 from Methanococcus maripaludis S2

Subject, 318 a.a., tRNA pseudouridine(55) synthase TruB from Dickeya dianthicola ME23

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 34/207 (16%)

Query: 31  GLVVIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPVALGNTTKCVPIWHIP 90
           G++++DKP G +S++V   V+ + N  KAGH G LDP  TG LPV LG  TK        
Sbjct: 13  GVLLLDKPQGASSNDVLQKVKRLFNANKAGHTGALDPLATGMLPVCLGEATKFSQYLLDA 72

Query: 91  PKEYVCLMHLHDDAELVDIE-NIFKE----------------FTGRIHQRPPLKAAVK-- 131
            K Y  +  L    +  D + N+ +E                F G   Q P + +A+K  
Sbjct: 73  DKRYRVIARLGLRTDTSDADGNVIQERLITFTRDLLMQALDGFRGDTKQVPSMYSALKYQ 132

Query: 132 ---------------RSLRIRKIYEIEILEIDGRDILFRTKCQSGTYLRKLVDDMGEALG 176
                          R  R   +YE++ +  +G ++     C  GTY+R ++DD+GE LG
Sbjct: 133 GRPLYEYARQGLVVPREARDITVYELQFIRWEGDELELEIHCSKGTYIRTIIDDLGEKLG 192

Query: 177 TSAHMQELRRTISGPFYENEAVYLQDL 203
             AH+  LRR     +     V L+ L
Sbjct: 193 CGAHVIYLRRLQVATYPTERMVTLEQL 219