Pairwise Alignments

Query, 333 a.a., RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 from Methanococcus maripaludis S2

Subject, 224 a.a., tRNA pseudouridine 55 synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 87.0 bits (214), Expect = 4e-22
 Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 35/207 (16%)

Query: 34  VIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPVALGNTTKCVPIWHIPPKE 93
           +++KP   TS +V   +RN L + K GH GTLDP  TG L +  G  TK +  +    KE
Sbjct: 10  LVNKPYRWTSFDVVKKIRNTLKIKKVGHAGTLDPLATGLLIICAGKKTKSINDYMGQEKE 69

Query: 94  Y---------VCLMHLHDDAELV---------DIENIFKEFTGRIHQRPPLKAAVKRSLR 135
           Y              L  + E+V          I+   K  TG I Q PP  +A+K+  +
Sbjct: 70  YTGTFVLGKTTASFDLEQEVEVVADPSHLTLEAIQEACKSLTGDIMQVPPTHSAIKKDGK 129

Query: 136 -----IRK------------IYEIEILEIDGRDILFRTKCQSGTYLRKLVDDMGEALGTS 178
                 RK            ++  EI   +  +I FR  C  GTY+R L  D+GEAL   
Sbjct: 130 RVYESARKGIDVKLDPRPVTVFVFEITRCELPEIDFRIVCSKGTYIRSLARDLGEALQVG 189

Query: 179 AHMQELRRTISGPFYENEAVYLQDLLD 205
           A+M  L RT  G  + ++A  + ++++
Sbjct: 190 AYMSALTRTRIGDSHLSDASEIDEIVE 216