Pairwise Alignments

Query, 333 a.a., RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 from Methanococcus maripaludis S2

Subject, 301 a.a., tRNA pseudouridine synthase B from Acinetobacter radioresistens SK82

 Score = 96.7 bits (239), Expect = 7e-25
 Identities = 72/255 (28%), Positives = 107/255 (41%), Gaps = 45/255 (17%)

Query: 31  GLVVIDKPSGPTSHEVAAWVRNMLNLVKAGHGGTLDPKVTGALPVALGNTTKCVPIWHIP 90
           G+ +++KP G +S+     VR +    KAGH G LDP  +G LP+ LG  TK        
Sbjct: 15  GVFLLNKPLGISSNAALQKVRWLYRAEKAGHTGALDPLASGLLPICLGEATKFSHYLLDS 74

Query: 91  PKEYVCLMHLHDDAELVDIEN------------------IFKEFTGRIHQRPPLKAAVK- 131
            K Y   + L       D+E                   +  +F G I Q PP+ +A+K 
Sbjct: 75  TKRYQATIQLGHSTTTGDVEGEILLQAEIPELDEERIRQVLAQFKGNIEQVPPMYSALKK 134

Query: 132 ----------------RSLRIRKIYEIEILEIDGRDILFRTKCQSGTYLRKLVDDMGEAL 175
                           R  R   IY IE+L    + I     C  GTY+R L +D+ +AL
Sbjct: 135 EGRPLYELARKGIEIEREARPVSIYAIELLSFTAQSITLDITCSKGTYIRVLGEDVAQAL 194

Query: 176 GTSAHMQELRRTISGPFYENEAVYLQDLLDAY-IFWKEDGNEEELRKIVKPLEYGLQHLK 234
           G+  H+  L R  +GPF         DL+ +Y I + E  NE E   ++ P+   + H  
Sbjct: 195 GSYGHLTYLHRIKTGPF---------DLIPSYTIEYLESLNEAEREALLLPVYAPVDHFP 245

Query: 235 KIIIKDSAVDAVCHG 249
           KI + +   +    G
Sbjct: 246 KIQVPEGRSEYFSRG 260