Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 328 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 191 VHKIYDMLPSNIEWEDEGDISNYLKNMCERIGRPVSDATPIVDGSLPD-GSRINILYSGD 249
           V ++ + L S  E    GD    ++ +   IG  V    P +   LP  G R   L    
Sbjct: 48  VDRLSEGLASTGERLAAGDGERIIRLVAHHIGAEVHAGAPRISAELPGTGERFEGLLPPV 107

Query: 250 VSLKGPSFTIRKFTDVPISITQIISWGTMSAQTAAYLWLCLEYGMSIFICGETASGKTTS 309
           V+   P+F IRK      ++   ++ G MSA  A  L   +    +I + G T+SGKTT 
Sbjct: 108 VA--APTFAIRKPAVAVFTLDDYVAAGIMSAPQAEALRHGVASRANILVAGGTSSGKTTL 165

Query: 310 LNAILPFI-KPKSKIFSCEDTSEVKPPNPVWQQLLTRERGPEESRVTLFDLLRAALRSRP 368
            NA+L  + K   ++   EDT E++   P    L T++        +L DL+R++LR RP
Sbjct: 166 TNALLAEVAKTSERVILIEDTRELQCAAPNLVALRTKD-----GVASLSDLVRSSLRLRP 220

Query: 369 NYIIVGEIRSVEGAVAFQAMQTGHP-VISTFHAAN----VRKMIQRLTGDPICIPQTFMD 423
           + I +GE+R  E     +A  TGHP  I T HA +    +R++ Q +    + +P+  + 
Sbjct: 221 DRIPIGEVRGAEALDLLKAWGTGHPGGIGTIHAGSAIGTLRRLEQLIQEAVVTVPRALIA 280

Query: 424 NLNVCLFQLAVYARGKFLRRVVSVEEIEG 452
                +  +AV +     RR+  +  ++G
Sbjct: 281 E---TIDLIAVLSGRGTARRLTELARVDG 306