Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 472 a.a., general secretion pathway protein GspE from Pseudomonas simiae WCS417

 Score = 58.2 bits (139), Expect = 7e-13
 Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 8/117 (6%)

Query: 296 IFICGETASGKTTSLNAILPFIKPK-SKIFSCEDTSEVKPPNPVWQQLLTRERGPEESRV 354
           + + G T SGKTTSL A L  +    S I + ED  E   P       +++ +   +  +
Sbjct: 242 VLVTGPTGSGKTTSLYAALARLDASTSNILTVEDPVEYDLPG------ISQIQVNAKIDM 295

Query: 355 TLFDLLRAALRSRPNYIIVGEIRSVEGA-VAFQAMQTGHPVISTFHAANVRKMIQRL 410
           T    LRA LR  P+ I++GEIR +E A +A QA  TGH V++T H  +    + RL
Sbjct: 296 TFGLALRAILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAVSAVNRL 352