Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 309 a.a., Conjugative transfer protein TrbB from Sphingobium sp. HT1-2

 Score = 83.2 bits (204), Expect = 1e-20
 Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 30/265 (11%)

Query: 210 ISNYLKNMCERIGRPVSDATPIVDGSLP---DGSRINILYSGDVS--LKGPSFTIRKFTD 264
           +   ++ +   +   V    PI+   LP   DG R    + G +      P F+IRK   
Sbjct: 38  VERIIRLVASHVRAEVHAGQPIISAELPPHADG-RAGERFEGVLPPVSSAPCFSIRKPAQ 96

Query: 265 VPISITQIISWGTMSAQTAAYLWLCLEYGMSIFICGETASGKTTSLNAILPFIKPK---- 320
              ++   ++ G M    A  L   +   ++I + G T+SGKTT  NA+L  + P+    
Sbjct: 97  RLHTLADYVADGLMGETVACALRAAVTERLNILVAGGTSSGKTTLANALLAEMAPENSAV 156

Query: 321 -SKIFSCEDTSEVKPPNPVWQQLLTRERGPEESRVTLFDLLRAALRSRPNYIIVGEIRSV 379
            S++   EDT E++ P P    L TR        V + DL+R+ +R RP+ IIVGE+R  
Sbjct: 157 DSRVILIEDTRELQCPLPDTVALRTRP-----PHVAMTDLVRSTMRLRPDRIIVGEVRGP 211

Query: 380 EGAVAFQAMQTGHP-VISTFHAANVRKMIQRLTGDPIC------IPQTFM-DNLNVCLFQ 431
           E     +A  TGHP  ++T HA +    + RL  + +C      +P+  + + ++V +F 
Sbjct: 212 EALDMLKAWNTGHPGGVATIHANSAAAALTRL--EQLCQEAVITVPRPLIAEAIDVVVF- 268

Query: 432 LAVYARGKFLRRVVSVEEIEGYYKE 456
             +  RG   RRV +V  + G   E
Sbjct: 269 --IAGRG-VDRRVATVARVTGLAPE 290