Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 568 a.a., Type II secretion system protein E from Methylophilus sp. DMC18

 Score = 61.6 bits (148), Expect = 8e-14
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 20/152 (13%)

Query: 296 IFICGETASGKTTSLNAILPFIK-PKSKIFSCEDTSEVKPPNPVWQQLLTRERGPEESRV 354
           + + G T SGKTT+L + L  +  P++K+ + ED  E + P  +  Q+       E+  +
Sbjct: 319 VLVTGPTGSGKTTTLYSALSELNTPETKVITVEDPVEYRLPGIIQTQV------NEKIEL 372

Query: 355 TLFDLLRAALRSRPNYIIVGEIRSVEGA-VAFQAMQTGHPVISTFHAANVRKMIQRLTGD 413
               LLRA LR  P+ ++VGE+R  E A    +A  TGH V+ST H           T D
Sbjct: 373 DFPKLLRAILRQDPDIVLVGEMRDEETAQTGLRASMTGHLVLSTLH-----------TND 421

Query: 414 PICIPQTFMDNLNVCLFQLAVYARGKFLRRVV 445
               P   +D + V  F +A+   G   +R+V
Sbjct: 422 ASTAPVRLID-MGVPRFMVAMSLLGVMAQRLV 452