Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 326 a.a., putative protein transport (VIMSS) from Escherichia coli BW25113

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 6/118 (5%)

Query: 296 IFICGETASGKTTSLNAILPFIKPKSK--IFSCEDTSEVKPPNPVWQQLLTRERGPEESR 353
           I + G T SGK+T+L A++ ++   +   I + ED  E    +   Q+ L ++R      
Sbjct: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS---QRCLIQQREIGLHC 179

Query: 354 VTLFDLLRAALRSRPNYIIVGEIRSVEG-AVAFQAMQTGHPVISTFHAANVRKMIQRL 410
           +T    LRAALR  P+ I++GE+R  E   +A  A +TGH V++T H     + ++RL
Sbjct: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237